Gene
RNA
| Item | Value |
|---|---|
| gene id | G74954 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 9487870 ~ 9488107 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU85496 | True | 238 | lncRNA | 0.39 | 1 | 9487870 | 9488107 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_09465977_09473475 | DNAJB12A | coding | downstream | 14395 | 9465948 ~ 9473475 (-) |
| CI01000012_09419200_09460604 | SPOCK2 | coding | downstream | 26582 | 9419095 ~ 9461288 (-) |
| CI01000012_09400481_09401810 | EIF4EBP2 | coding | downstream | 85492 | 9398076 ~ 9402378 (-) |
| CI01000012_09379379_09394499 | PALD1B | coding | downstream | 92820 | 9379151 ~ 9395050 (-) |
| CI01000012_09358336_09370502 | NA | coding | downstream | 117250 | 9358098 ~ 9370620 (-) |
| CI01000012_09513757_09517777 | CUEDC2 | coding | upstream | 25161 | 9513268 ~ 9517777 (-) |
| CI01000012_09589749_09615649 | PAX2A, PAX2 | coding | upstream | 100337 | 9588444 ~ 9615649 (-) |
| CI01000012_09754856_09756772 | CHST3A | coding | upstream | 266488 | 9754595 ~ 9756956 (-) |
| CI01000012_09782840_09786910 | LRIT2 | coding | upstream | 294503 | 9782610 ~ 9786910 (-) |
| CI01000012_09789066_09792437 | LRIT1A | coding | upstream | 299588 | 9787695 ~ 9792437 (-) |
| G74953 | NA | non-coding | downstream | 276 | 9487267 ~ 9487594 (-) |
| G74824 | NA | non-coding | downstream | 11876 | 9474304 ~ 9475994 (-) |
| G74921 | NA | non-coding | downstream | 147465 | 9340200 ~ 9340405 (-) |
| CI01000012_09001061_09005079 | CXCL12A, CXCL12B, CXCL12, A-SDF1A, SDF1 | non-coding | downstream | 481080 | 8998826 ~ 9005079 (-) |
| G74887 | NA | non-coding | downstream | 492971 | 8994610 ~ 8994899 (-) |
| G74957 | NA | non-coding | upstream | 2295 | 9490402 ~ 9490617 (-) |
| G74955 | NA | non-coding | upstream | 4945 | 9493052 ~ 9493918 (-) |
| G74968 | NA | non-coding | upstream | 48979 | 9537086 ~ 9537398 (-) |
| G74969 | NA | non-coding | upstream | 49293 | 9537400 ~ 9537606 (-) |
| G74971 | NA | non-coding | upstream | 52329 | 9540436 ~ 9540649 (-) |
| CI01000012_09082056_09083285 | NA | other | downstream | 404381 | 9081877 ~ 9083489 (-) |
| CI01000012_09071892_09073410 | NA | other | downstream | 414413 | 9071371 ~ 9073457 (-) |
| CI01000012_09068458_09070536 | NA | other | downstream | 417203 | 9067906 ~ 9070765 (-) |
| G74701 | NA | other | downstream | 1120227 | 8367019 ~ 8367643 (-) |
| G74982 | NA | other | upstream | 87541 | 9575648 ~ 9576149 (-) |
| G75608 | NA | other | upstream | 1123808 | 10611915 ~ 10620871 (-) |
| CI01000012_12047175_12052116 | NA | other | upstream | 2560937 | 12046728 ~ 12052541 (-) |
| CI01000012_12079581_12084139 | NA | other | upstream | 2590829 | 12078936 ~ 12084260 (-) |
| CI01000012_12954694_12954954 | SF3B5, BRAFLDRAFT_284483 | other | upstream | 3466339 | 12954446 ~ 12957833 (-) |
