Gene
RNA
| Item | Value |
|---|---|
| gene id | G75001 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 9639446 ~ 9639649 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU85554 | True | 204 | lncRNA | 0.34 | 1 | 9639446 | 9639649 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_09589749_09615649 | PAX2A, PAX2 | coding | downstream | 23797 | 9588444 ~ 9615649 (-) |
| CI01000012_09513757_09517777 | CUEDC2 | coding | downstream | 121669 | 9513268 ~ 9517777 (-) |
| CI01000012_09465977_09473475 | DNAJB12A | coding | downstream | 165971 | 9465948 ~ 9473475 (-) |
| CI01000012_09419200_09460604 | SPOCK2 | coding | downstream | 178158 | 9419095 ~ 9461288 (-) |
| CI01000012_09400481_09401810 | EIF4EBP2 | coding | downstream | 237068 | 9398076 ~ 9402378 (-) |
| CI01000012_09754856_09756772 | CHST3A | coding | upstream | 114946 | 9754595 ~ 9756956 (-) |
| CI01000012_09782840_09786910 | LRIT2 | coding | upstream | 142961 | 9782610 ~ 9786910 (-) |
| CI01000012_09789066_09792437 | LRIT1A | coding | upstream | 148046 | 9787695 ~ 9792437 (-) |
| CI01000012_09830411_09851586 | OGDHL | coding | upstream | 190516 | 9830165 ~ 9851870 (-) |
| CI01000012_09862141_09892366 | PARGA, PARG | coding | upstream | 222226 | 9861875 ~ 9892366 (-) |
| G74997 | NA | non-coding | downstream | 2302 | 9636905 ~ 9637144 (-) |
| G74996 | NA | non-coding | downstream | 3048 | 9636147 ~ 9636398 (-) |
| G74994 | NA | non-coding | downstream | 7996 | 9631239 ~ 9631450 (-) |
| G74986 | NA | non-coding | downstream | 54276 | 9584874 ~ 9585170 (-) |
| G74982 | NA | non-coding | downstream | 63297 | 9575648 ~ 9576149 (-) |
| G75004 | NA | non-coding | upstream | 2061 | 9641710 ~ 9641944 (-) |
| G75189 | NA | non-coding | upstream | 126796 | 9766445 ~ 9769509 (-) |
| G75212 | NA | non-coding | upstream | 176329 | 9815978 ~ 9817036 (-) |
| G75230 | NA | non-coding | upstream | 347716 | 9987365 ~ 9987685 (-) |
| G75645 | NA | non-coding | upstream | 446302 | 10085951 ~ 10086261 (-) |
| CI01000012_09082056_09083285 | NA | other | downstream | 555957 | 9081877 ~ 9083489 (-) |
| CI01000012_09071892_09073410 | NA | other | downstream | 565989 | 9071371 ~ 9073457 (-) |
| CI01000012_09068458_09070536 | NA | other | downstream | 568779 | 9067906 ~ 9070765 (-) |
| G75608 | NA | other | upstream | 972266 | 10611915 ~ 10620871 (-) |
| CI01000012_12047175_12052116 | NA | other | upstream | 2409395 | 12046728 ~ 12052541 (-) |
| CI01000012_12079581_12084139 | NA | other | upstream | 2439287 | 12078936 ~ 12084260 (-) |
| CI01000012_12954694_12954954 | SF3B5, BRAFLDRAFT_284483 | other | upstream | 3314797 | 12954446 ~ 12957833 (-) |
| G77287 | NA | other | upstream | 3979627 | 13619276 ~ 13633819 (-) |
