G75087


Basic Information

Item Value
gene id G75087
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 9858290 ~ 9858518 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU85646
GTTTTGATTTGTGCACCCAGAATGCACTGCAGCTTGAAGCTTTTTGTTGAATCTCACCATTGTTGAGATTCATATGCTGATTCTTGATGTCAGTGTGTTTCTGAATAATGCTGTATTTCAAAACTTACTTTCCAGCATGTTTTTTTAAAAATTCTTCAAATGATCAGATTGCCATGACACTGCTAGAGCAAATACTGCAGTCTCACAAGATCAGTAGAAAGTTTAAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU85646 True 229 lncRNA 0.36 1 9858290 9858518

Neighbor

gene id symbol gene type direction distance location
CI01000012_09828421_09828926 NA coding upstream 28902 9828421 ~ 9829388 (+)
CI01000012_09815706_09822346 CHATA, CHAT coding upstream 35619 9815706 ~ 9822671 (+)
CI01000012_09812937_09814478 SLC18A3, SLC18A3A coding upstream 42873 9812421 ~ 9815417 (+)
CI01000012_09796386_09801947 RGR, RGRA coding upstream 55746 9796291 ~ 9802544 (+)
CI01000012_09764936_09778598 CDHR1A coding upstream 78889 9764582 ~ 9779401 (+)
CI01000012_09977219_09983804 NA coding downstream 118493 9977011 ~ 9983866 (+)
CI01000012_10196272_10198737 HPS6 coding downstream 337754 10196272 ~ 10198816 (+)
CI01000012_10223957_10235955 NA coding downstream 365179 10223697 ~ 10236276 (+)
CI01000012_10244843_10249396 NA coding downstream 386325 10244843 ~ 10249499 (+)
CI01000012_10260457_10272063 NT5C2B, NT5C2, NT5C2A coding downstream 401217 10259735 ~ 10272262 (+)
G75055 NA non-coding upstream 116042 9741467 ~ 9742248 (+)
G74017 NA non-coding upstream 227483 9616330 ~ 9630807 (+)
G74014 NA non-coding upstream 242201 9612580 ~ 9616089 (+)
G74045 NA non-coding upstream 282283 9575594 ~ 9576007 (+)
G74040 NA non-coding upstream 303098 9554657 ~ 9555192 (+)
G75089 NA non-coding downstream 1161 9859679 ~ 9859954 (+)
G75113 NA non-coding downstream 62855 9921373 ~ 9922152 (+)
G75115 NA non-coding downstream 73016 9931534 ~ 9931876 (+)
G75147 NA non-coding downstream 127594 9986112 ~ 9986370 (+)
G75148 NA non-coding downstream 128847 9987365 ~ 9987724 (+)
G73578 NA other upstream 1490663 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 2050435 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 3933985 5922385 ~ 5929186 (+)
G71623 NA other upstream 4041685 5813517 ~ 5816605 (+)
G71548 NA other upstream 4296857 5550493 ~ 5561433 (+)
G75533 NA other downstream 1286299 11144817 ~ 11145739 (+)
G76385 NA other downstream 2772237 12630755 ~ 12675666 (+)
G76374 NA other downstream 2887013 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 3156988 13029435 ~ 13038899 (+)

Expression


Co-expression Network