G235510


Basic Information

Item Value
gene id G235510
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019170901.1
NCBI id APWO02000499.1
chromosome length 310558
location 176938 ~ 202618 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU320506
GACTATGAGAAGAGCATCAGTGTGAAAGGTCACGTAGGACAAACAGTGAACATCAGCTGCAATTACCCACAATCCCTCATCAGTAAACCCAAGTTCCTCTGTAGGAGAAGGAGCACTGCTGACTGTTATTATACAGCATCTGCTAAAGAGAGTAAAAGGTGGATTAAGGAGGGGAAATTCTCTCTGTATGACGACAGAGCAAAGAAGACTTTCACAGTGAGCATCAGCAGTGTGACTGAGGGAGATTCTGGTGAATACTGGTGTGGAGCTGAATCAGACTGGGAAAAAGATCTTGGATACAAGGTTTATTTCACACAGATCAACCTCAGAGTTACTGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320506 True 340 lncRNA 0.44 2 176938 202618

Neighbor

gene id symbol gene type direction distance location
LOC111196686 NA coding upstream 15463 156046 ~ 161475 (+)
LOC111196685 NA coding upstream 46597 121000 ~ 130341 (+)
LOC111196693 NA coding upstream 63530 106202 ~ 113408 (+)
LOC111196684 NA coding upstream 74244 95707 ~ 102694 (+)
LOC111196691 NA coding upstream 82238 89563 ~ 94700 (+)
LOC103027884 NA coding downstream 9286 211904 ~ 216369 (+)
LOC111196692 NA coding downstream 15195 217813 ~ 224768 (+)
LOC111196688 NA coding downstream 24231 226849 ~ 229983 (+)
LOC111196689 NA coding downstream 39697 242315 ~ 261740 (+)
LOC103025438 NA coding downstream 69081 271699 ~ 275746 (+)
G235513 LOC108271652 non-coding upstream 9315 160915 ~ 167623 (+)
G235498 NA non-coding upstream 22285 143600 ~ 154653 (+)
G235508 NA non-coding upstream 31743 144347 ~ 145195 (+)
G235490 NA non-coding upstream 87534 76417 ~ 89404 (+)
G235526 NA non-coding downstream 28931 231549 ~ 232370 (+)
G235527 NA non-coding downstream 29850 232468 ~ 234112 (+)
G235593 NA non-coding downstream 42797 245415 ~ 245619 (+)
G235600 NA non-coding downstream 85943 288561 ~ 291723 (+)
LOC103028116 NA other upstream 154369 20689 ~ 22569 (+)

Expression


Co-expression Network