G75470


Basic Information

Item Value
gene id G75470
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 10687242 ~ 10687474 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU86084
ATTTCTTATTATTTTCAAAGTTGAAAACTCTTGTGCTTGTTTTTGTGGAAACTGATACATTTTTTTCAGGATTCTTTGATGAATAGTTTAAAAGAACAACATTTATTTGAAATAGAAATCTTTTGTAACATTATACTGTAAAGTCTTTACTTTCGCACACAATAATGCACCTTTGCTGAATTATTCATTTCTTTCACACTCACATATGCACGCACGCACACAAAATATCTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86084 True 233 lncRNA 0.29 1 10687242 10687474

Neighbor

gene id symbol gene type direction distance location
CI01000012_10661067_10678624 OGFRL1 coding upstream 7826 10660689 ~ 10679416 (+)
CI01000012_10608607_10619833 NA coding upstream 66784 10608607 ~ 10620458 (+)
CI01000012_10572910_10604787 NA coding upstream 81962 10572830 ~ 10605280 (+)
CI01000012_10502102_10533782 NA coding upstream 153300 10502102 ~ 10533942 (+)
CI01000012_10499885_10500843 SDHAF4 coding upstream 186183 10499215 ~ 10501778 (+)
CI01000012_10714254_10788932 NA coding downstream 26780 10714254 ~ 10788932 (+)
CI01000012_10852509_10860759 NA coding downstream 162510 10849984 ~ 10860868 (+)
CI01000012_10892631_10918617 KCNQ5 coding downstream 205157 10892631 ~ 10918617 (+)
CI01000012_10922409_10930704 DDX43 coding downstream 234935 10922409 ~ 10931285 (+)
CI01000012_11011437_11013922 NA coding downstream 323890 11011364 ~ 11013931 (+)
G75469 NA non-coding upstream 200 10686687 ~ 10687042 (+)
G75468 NA non-coding upstream 557 10686465 ~ 10686685 (+)
G75467 NA non-coding upstream 988 10686017 ~ 10686254 (+)
G75442 NA non-coding upstream 167119 10519203 ~ 10520123 (+)
G75474 NA non-coding downstream 16677 10704151 ~ 10704372 (+)
G75477 NA non-coding downstream 108945 10796419 ~ 10796654 (+)
G75407 NA non-coding downstream 232742 10920216 ~ 10922341 (+)
G75398 NA non-coding downstream 251423 10938897 ~ 10942836 (+)
G75404 NA non-coding downstream 255976 10943450 ~ 10947486 (+)
CI01000012_10223957_10235955 NA other upstream 462955 10223697 ~ 10236276 (+)
G73578 NA other upstream 2319615 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 2879387 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 4762937 5922385 ~ 5929186 (+)
G71623 NA other upstream 4870637 5813517 ~ 5816605 (+)
G75533 NA other downstream 457343 11144817 ~ 11145739 (+)
G76385 NA other downstream 1943281 12630755 ~ 12675666 (+)
G76374 NA other downstream 2058057 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 2328032 13029435 ~ 13038899 (+)
G76645 NA other downstream 2964385 13651859 ~ 13652234 (+)

Expression


Co-expression Network