Gene
RNA
| Item | Value |
|---|---|
| gene id | G75477 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 10796419 ~ 10796654 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: protocadherin gamma-A6-like isoform X8 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU86091 | True | 236 | lncRNA | 0.35 | 1 | 10796419 | 10796654 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_10714254_10788932 | NA | coding | upstream | 7487 | 10714254 ~ 10788932 (+) |
| CI01000012_10661067_10678624 | OGFRL1 | coding | upstream | 117003 | 10660689 ~ 10679416 (+) |
| CI01000012_10608607_10619833 | NA | coding | upstream | 175961 | 10608607 ~ 10620458 (+) |
| CI01000012_10572910_10604787 | NA | coding | upstream | 191139 | 10572830 ~ 10605280 (+) |
| CI01000012_10502102_10533782 | NA | coding | upstream | 262477 | 10502102 ~ 10533942 (+) |
| CI01000012_10852509_10860759 | NA | coding | downstream | 53330 | 10849984 ~ 10860868 (+) |
| CI01000012_10892631_10918617 | KCNQ5 | coding | downstream | 95977 | 10892631 ~ 10918617 (+) |
| CI01000012_10922409_10930704 | DDX43 | coding | downstream | 125755 | 10922409 ~ 10931285 (+) |
| CI01000012_11011437_11013922 | NA | coding | downstream | 214710 | 11011364 ~ 11013931 (+) |
| CI01000012_11043669_11044569 | NA | coding | downstream | 246973 | 11043394 ~ 11044670 (+) |
| G75474 | NA | non-coding | upstream | 92047 | 10704151 ~ 10704372 (+) |
| G75470 | NA | non-coding | upstream | 108945 | 10687242 ~ 10687474 (+) |
| G75469 | NA | non-coding | upstream | 109377 | 10686687 ~ 10687042 (+) |
| G75468 | NA | non-coding | upstream | 109734 | 10686465 ~ 10686685 (+) |
| G75467 | NA | non-coding | upstream | 110165 | 10686017 ~ 10686254 (+) |
| G75407 | NA | non-coding | downstream | 123562 | 10920216 ~ 10922341 (+) |
| G75398 | NA | non-coding | downstream | 142243 | 10938897 ~ 10942836 (+) |
| G75404 | NA | non-coding | downstream | 146796 | 10943450 ~ 10947486 (+) |
| G75552 | NA | non-coding | downstream | 336714 | 11133368 ~ 11133689 (+) |
| CI01000012_10223957_10235955 | NA | other | upstream | 572132 | 10223697 ~ 10236276 (+) |
| G73578 | NA | other | upstream | 2428792 | 8366806 ~ 8367627 (+) |
| CI01000012_07806089_07811902 | BEND3 | other | upstream | 2988564 | 7805248 ~ 7811902 (+) |
| CI01000012_05923216_05928055 | SRD5A2B | other | upstream | 4872114 | 5922385 ~ 5929186 (+) |
| G71623 | NA | other | upstream | 4979814 | 5813517 ~ 5816605 (+) |
| G75533 | NA | other | downstream | 348163 | 11144817 ~ 11145739 (+) |
| G76385 | NA | other | downstream | 1834101 | 12630755 ~ 12675666 (+) |
| G76374 | NA | other | downstream | 1948877 | 12745531 ~ 12749169 (+) |
| CI01000012_13029637_13033226 | RGS17 | other | downstream | 2218852 | 13029435 ~ 13038899 (+) |
| G76645 | NA | other | downstream | 2855205 | 13651859 ~ 13652234 (+) |
