Gene
RNA
| Item | Value |
|---|---|
| gene id | G75404 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 10943450 ~ 10947486 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU86017 | True | 3710 | lncRNA | 0.38 | 2 | 10943450 | 10947486 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_10922409_10930704 | DDX43 | coding | upstream | 12165 | 10922409 ~ 10931285 (+) |
| CI01000012_10892631_10918617 | KCNQ5 | coding | upstream | 24833 | 10892631 ~ 10918617 (+) |
| CI01000012_10852509_10860759 | NA | coding | upstream | 82582 | 10849984 ~ 10860868 (+) |
| CI01000012_10714254_10788932 | NA | coding | upstream | 154518 | 10714254 ~ 10788932 (+) |
| CI01000012_10661067_10678624 | OGFRL1 | coding | upstream | 264034 | 10660689 ~ 10679416 (+) |
| CI01000012_11011437_11013922 | NA | coding | downstream | 63878 | 11011364 ~ 11013931 (+) |
| CI01000012_11043669_11044569 | NA | coding | downstream | 96141 | 11043394 ~ 11044670 (+) |
| CI01000012_11091957_11093675 | CCDC85A | coding | downstream | 144471 | 11091957 ~ 11093774 (+) |
| CI01000012_11277561_11292490 | VRK2 | coding | downstream | 330075 | 11277561 ~ 11292636 (+) |
| CI01000012_11319849_11326035 | NA | coding | downstream | 371574 | 11319060 ~ 11326904 (+) |
| G75398 | NA | non-coding | upstream | 614 | 10938897 ~ 10942836 (+) |
| G75407 | NA | non-coding | upstream | 21109 | 10920216 ~ 10922341 (+) |
| G75477 | NA | non-coding | upstream | 146796 | 10796419 ~ 10796654 (+) |
| G75474 | NA | non-coding | upstream | 239078 | 10704151 ~ 10704372 (+) |
| G75470 | NA | non-coding | upstream | 255976 | 10687242 ~ 10687474 (+) |
| G75552 | NA | non-coding | downstream | 185882 | 11133368 ~ 11133689 (+) |
| G75554 | NA | non-coding | downstream | 187887 | 11135373 ~ 11135605 (+) |
| G75563 | NA | non-coding | downstream | 204573 | 11152059 ~ 11152384 (+) |
| G75566 | NA | non-coding | downstream | 207285 | 11154771 ~ 11155058 (+) |
| CI01000012_10223957_10235955 | NA | other | upstream | 719163 | 10223697 ~ 10236276 (+) |
| G73578 | NA | other | upstream | 2575823 | 8366806 ~ 8367627 (+) |
| CI01000012_07806089_07811902 | BEND3 | other | upstream | 3135595 | 7805248 ~ 7811902 (+) |
| CI01000012_05923216_05928055 | SRD5A2B | other | upstream | 5019145 | 5922385 ~ 5929186 (+) |
| G71623 | NA | other | upstream | 5126845 | 5813517 ~ 5816605 (+) |
| G75533 | NA | other | downstream | 197331 | 11144817 ~ 11145739 (+) |
| G76385 | NA | other | downstream | 1683269 | 12630755 ~ 12675666 (+) |
| G76374 | NA | other | downstream | 1798045 | 12745531 ~ 12749169 (+) |
| CI01000012_13029637_13033226 | RGS17 | other | downstream | 2068020 | 13029435 ~ 13038899 (+) |
| G76645 | NA | other | downstream | 2704373 | 13651859 ~ 13652234 (+) |
