G75554


Basic Information

Item Value
gene id G75554
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 11135373 ~ 11135605 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU86178
GTCCATGTCCTTCTTTATTCAGTCAAAAAGAAATGAAGGTTTTTGAGGAAAACATTCGAGGATTTTTCTCCATATAGTGGACTTCAGTGGTCTCCAAACGGTTGAAGGTAAAAATTACAGTTTCAGTGCAGCTTCTCGTCTAGACTGAAAAATACACTTTTTAACGCTTTATTTGAGTGTAAGAAACAACATTTATGTGACAGTTCATGTCAGATTTTGTTACTGATTTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86178 True 233 lncRNA 0.34 1 11135373 11135605

Neighbor

gene id symbol gene type direction distance location
CI01000012_11091957_11093675 CCDC85A coding upstream 41599 11091957 ~ 11093774 (+)
CI01000012_11043669_11044569 NA coding upstream 90732 11043394 ~ 11044670 (+)
CI01000012_11011437_11013922 NA coding upstream 121442 11011364 ~ 11013931 (+)
CI01000012_10922409_10930704 DDX43 coding upstream 204088 10922409 ~ 10931285 (+)
CI01000012_10892631_10918617 KCNQ5 coding upstream 216756 10892631 ~ 10918617 (+)
CI01000012_11277561_11292490 VRK2 coding downstream 141956 11277561 ~ 11292636 (+)
CI01000012_11319849_11326035 NA coding downstream 183455 11319060 ~ 11326904 (+)
CI01000012_11616967_11694276 NA coding downstream 479942 11615547 ~ 11694284 (+)
CI01000012_11698150_11702986 NA coding downstream 561510 11697115 ~ 11703213 (+)
CI01000012_11859839_11869022 PAPOLG coding downstream 724144 11859749 ~ 11870657 (+)
G75552 NA non-coding upstream 1684 11133368 ~ 11133689 (+)
G75404 NA non-coding upstream 187887 10943450 ~ 10947486 (+)
G75398 NA non-coding upstream 192537 10938897 ~ 10942836 (+)
G75407 NA non-coding upstream 213032 10920216 ~ 10922341 (+)
G75563 NA non-coding downstream 16454 11152059 ~ 11152384 (+)
G75566 NA non-coding downstream 19166 11154771 ~ 11155058 (+)
G75571 NA non-coding downstream 26623 11162228 ~ 11162545 (+)
G75578 NA non-coding downstream 32948 11168553 ~ 11168781 (+)
G75583 NA non-coding downstream 38882 11174487 ~ 11174715 (+)
CI01000012_10223957_10235955 NA other upstream 911086 10223697 ~ 10236276 (+)
G73578 NA other upstream 2767746 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 3327518 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 5211068 5922385 ~ 5929186 (+)
G71623 NA other upstream 5318768 5813517 ~ 5816605 (+)
G75533 NA other downstream 9212 11144817 ~ 11145739 (+)
G76385 NA other downstream 1495150 12630755 ~ 12675666 (+)
G76374 NA other downstream 1609926 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 1879901 13029435 ~ 13038899 (+)
G76645 NA other downstream 2516254 13651859 ~ 13652234 (+)

Expression


Co-expression Network