G75533


Basic Information

Item Value
gene id G75533
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 11144817 ~ 11145739 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU86153
ATCTCTTTTGTCCACTTTCAACCAATTCTGTCCTGATTTCTTCAAGGGGAGGGTCTACACTTATCTGGAAACACTTCAGAAGTTTCGAAGTTGTCATCTGGTTGGTTGAATTACACAGGATGTGGAGGAGACGTGTGTGTCGCGTTCTTTAACAGTCCGTCTGGAAACAAATGCCGTGACGCTAACCCCCCTCGTGGAAGAAGAACGCGGTCGTGTTTACAAGCGCTTACCAGGATCAACTAAAAGCTGGATTTTCAAAAGTAGATTTTCACGGCTCCAATGTTGCAGTAAACTTGCACAACATTCTTGAATTAATAATTTATAGATGCACGCTGGTCTGTTATTGCAGGGACATCGACATTACATTTTCACGCCTCTAAACATGACGTGGAACAAAACGAACTGTGATTGGTTGCGTTACATGTCAGTCAAACGTCCTCTTGAGTGGTCCTTGGCCAATGAAAGCTGCGATAGAGTCCAGACCTTCTGCCATCAGTCTTAAGGTCTGGCTACGCAAGACTAGTAGGCGGAGAGTAGGCAGTCTTTTGCACTGTTCGAACGCATTCAACCACATGGGCGTCTATACTATTGTAATGATGGGTCGGCAGAGCGGGGATCCATTTGCAAGCTTTATTAAGAACAGTATTTACACAGGTAGACAGGGGCAGAGGCAGGAACATAAACAAGGACAGGCAATGGTCGAGGCAGGCGGCAGACAAACAGAATCAGGGTACAGGCAAGGATCAGGGCAGGCAGCAAACAATCACAGTCCAGGAAACAGGCAAAGATCAGGGCAGGCAGCAGAGAATCACAAAGAATAAACAATCCAACCGGAAACCAGGAAACAGTCCACAAGAAAACGCTTAGAAATGATCACAACAGCAAATCAAGACTTCGCAATGAGGTGGTGTGTGTGTGAGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86153 True 923 TUCP 0.46 1 11144817 11145739

Neighbor

gene id symbol gene type direction distance location
CI01000012_11091957_11093675 CCDC85A coding upstream 51043 11091957 ~ 11093774 (+)
CI01000012_11043669_11044569 NA coding upstream 100176 11043394 ~ 11044670 (+)
CI01000012_11011437_11013922 NA coding upstream 130886 11011364 ~ 11013931 (+)
CI01000012_10922409_10930704 DDX43 coding upstream 213532 10922409 ~ 10931285 (+)
CI01000012_10892631_10918617 KCNQ5 coding upstream 226200 10892631 ~ 10918617 (+)
CI01000012_11277561_11292490 VRK2 coding downstream 131822 11277561 ~ 11292636 (+)
CI01000012_11319849_11326035 NA coding downstream 173321 11319060 ~ 11326904 (+)
CI01000012_11616967_11694276 NA coding downstream 469808 11615547 ~ 11694284 (+)
CI01000012_11698150_11702986 NA coding downstream 551376 11697115 ~ 11703213 (+)
CI01000012_11859839_11869022 PAPOLG coding downstream 714010 11859749 ~ 11870657 (+)
G75554 NA non-coding upstream 9212 11135373 ~ 11135605 (+)
G75552 NA non-coding upstream 11128 11133368 ~ 11133689 (+)
G75404 NA non-coding upstream 197331 10943450 ~ 10947486 (+)
G75398 NA non-coding upstream 201981 10938897 ~ 10942836 (+)
G75563 NA non-coding downstream 6320 11152059 ~ 11152384 (+)
G75566 NA non-coding downstream 9032 11154771 ~ 11155058 (+)
G75571 NA non-coding downstream 16489 11162228 ~ 11162545 (+)
G75578 NA non-coding downstream 22814 11168553 ~ 11168781 (+)
G75583 NA non-coding downstream 28748 11174487 ~ 11174715 (+)
CI01000012_10223957_10235955 NA other upstream 920530 10223697 ~ 10236276 (+)
G73578 NA other upstream 2777190 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 3336962 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 5220512 5922385 ~ 5929186 (+)
G71623 NA other upstream 5328212 5813517 ~ 5816605 (+)
G76385 NA other downstream 1485016 12630755 ~ 12675666 (+)
G76374 NA other downstream 1599792 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 1869767 13029435 ~ 13038899 (+)
G76645 NA other downstream 2506120 13651859 ~ 13652234 (+)
G76656 NA other downstream 2557748 13703487 ~ 13739731 (+)

Expression


Co-expression Network