Gene
RNA
| Item | Value |
|---|---|
| gene id | G76181 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 11840055 ~ 11841811 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU86910 | True | 1087 | lncRNA | 0.48 | 2 | 11840055 | 11841811 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_11698150_11702986 | NA | coding | upstream | 136842 | 11697115 ~ 11703213 (+) |
| CI01000012_11616967_11694276 | NA | coding | upstream | 145771 | 11615547 ~ 11694284 (+) |
| CI01000012_11319849_11326035 | NA | coding | upstream | 513151 | 11319060 ~ 11326904 (+) |
| CI01000012_11277561_11292490 | VRK2 | coding | upstream | 547419 | 11277561 ~ 11292636 (+) |
| CI01000012_11091957_11093675 | CCDC85A | coding | upstream | 746281 | 11091957 ~ 11093774 (+) |
| CI01000012_11859839_11869022 | PAPOLG | coding | downstream | 17938 | 11859749 ~ 11870657 (+) |
| CI01000012_11874504_11884601 | REL | coding | downstream | 32693 | 11874504 ~ 11885292 (+) |
| CI01000012_11897443_11903607 | PDLIM1 | coding | downstream | 55632 | 11897443 ~ 11903607 (+) |
| CI01000012_11913513_11921468 | SGPL1 | coding | downstream | 71702 | 11913513 ~ 11921935 (+) |
| CI01000012_11932267_11962143 | NA | coding | downstream | 90456 | 11932267 ~ 11962208 (+) |
| G76152 | NA | non-coding | upstream | 45837 | 11794011 ~ 11794218 (+) |
| G76151 | NA | non-coding | upstream | 47906 | 11791948 ~ 11792149 (+) |
| G76150 | NA | non-coding | upstream | 48413 | 11791343 ~ 11791642 (+) |
| G76148 | NA | non-coding | upstream | 51146 | 11788691 ~ 11788909 (+) |
| G76146 | NA | non-coding | upstream | 52670 | 11787039 ~ 11787385 (+) |
| G76261 | NA | non-coding | downstream | 54188 | 11895999 ~ 11896199 (+) |
| G76198 | NA | non-coding | downstream | 78448 | 11920259 ~ 11925517 (+) |
| G76247 | NA | non-coding | downstream | 122713 | 11964524 ~ 11965309 (+) |
| G76212 | NA | non-coding | downstream | 184032 | 12025843 ~ 12029190 (+) |
| G76236 | NA | non-coding | downstream | 188479 | 12030290 ~ 12031920 (+) |
| G75533 | NA | other | upstream | 694316 | 11144817 ~ 11145739 (+) |
| CI01000012_10223957_10235955 | NA | other | upstream | 1615768 | 10223697 ~ 10236276 (+) |
| G73578 | NA | other | upstream | 3472428 | 8366806 ~ 8367627 (+) |
| CI01000012_07806089_07811902 | BEND3 | other | upstream | 4032200 | 7805248 ~ 7811902 (+) |
| CI01000012_05923216_05928055 | SRD5A2B | other | upstream | 5915750 | 5922385 ~ 5929186 (+) |
| G76385 | NA | other | downstream | 788944 | 12630755 ~ 12675666 (+) |
| G76374 | NA | other | downstream | 903720 | 12745531 ~ 12749169 (+) |
| CI01000012_13029637_13033226 | RGS17 | other | downstream | 1173695 | 13029435 ~ 13038899 (+) |
| G76645 | NA | other | downstream | 1810048 | 13651859 ~ 13652234 (+) |
| G76656 | NA | other | downstream | 1861676 | 13703487 ~ 13739731 (+) |
