Gene
RNA
| Item | Value |
|---|---|
| gene id | G76198 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 11920259 ~ 11925517 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU86938 | False | 929 | lncRNA | 0.34 | 2 | 11920259 | 11925488 |
| TU86939 | True | 918 | lncRNA | 0.34 | 2 | 11920259 | 11925517 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_11897443_11903607 | PDLIM1 | coding | upstream | 16652 | 11897443 ~ 11903607 (+) |
| CI01000012_11874504_11884601 | REL | coding | upstream | 34967 | 11874504 ~ 11885292 (+) |
| CI01000012_11859839_11869022 | PAPOLG | coding | upstream | 49602 | 11859749 ~ 11870657 (+) |
| CI01000012_11698150_11702986 | NA | coding | upstream | 217046 | 11697115 ~ 11703213 (+) |
| CI01000012_11616967_11694276 | NA | coding | upstream | 225975 | 11615547 ~ 11694284 (+) |
| CI01000012_11932267_11962143 | NA | coding | downstream | 6750 | 11932267 ~ 11962208 (+) |
| CI01000012_11981083_11993407 | RET | coding | downstream | 55566 | 11981083 ~ 11994093 (+) |
| CI01000012_11995593_12005292 | CGAT2, CSGALNACT2 | coding | downstream | 70076 | 11995593 ~ 12005352 (+) |
| CI01000012_12016924_12024791 | MCMBP | coding | downstream | 91407 | 12016924 ~ 12025035 (+) |
| CI01000012_12054427_12060390 | TIAL1 | coding | downstream | 128910 | 12054427 ~ 12060390 (+) |
| G76261 | NA | non-coding | upstream | 24060 | 11895999 ~ 11896199 (+) |
| G76181 | NA | non-coding | upstream | 78448 | 11840055 ~ 11841811 (+) |
| G76152 | NA | non-coding | upstream | 126041 | 11794011 ~ 11794218 (+) |
| G76151 | NA | non-coding | upstream | 128110 | 11791948 ~ 11792149 (+) |
| G76150 | NA | non-coding | upstream | 128617 | 11791343 ~ 11791642 (+) |
| G76247 | NA | non-coding | downstream | 39007 | 11964524 ~ 11965309 (+) |
| G76212 | NA | non-coding | downstream | 100326 | 12025843 ~ 12029190 (+) |
| G76236 | NA | non-coding | downstream | 104773 | 12030290 ~ 12031920 (+) |
| G76281 | NA | non-coding | downstream | 108286 | 12033803 ~ 12034004 (+) |
| G76238 | NA | non-coding | downstream | 108998 | 12034515 ~ 12035608 (+) |
| G75533 | NA | other | upstream | 774520 | 11144817 ~ 11145739 (+) |
| CI01000012_10223957_10235955 | NA | other | upstream | 1695972 | 10223697 ~ 10236276 (+) |
| G73578 | NA | other | upstream | 3552632 | 8366806 ~ 8367627 (+) |
| CI01000012_07806089_07811902 | BEND3 | other | upstream | 4112404 | 7805248 ~ 7811902 (+) |
| CI01000012_05923216_05928055 | SRD5A2B | other | upstream | 5995954 | 5922385 ~ 5929186 (+) |
| G76385 | NA | other | downstream | 705238 | 12630755 ~ 12675666 (+) |
| G76374 | NA | other | downstream | 820014 | 12745531 ~ 12749169 (+) |
| CI01000012_13029637_13033226 | RGS17 | other | downstream | 1089989 | 13029435 ~ 13038899 (+) |
| G76645 | NA | other | downstream | 1726342 | 13651859 ~ 13652234 (+) |
| G76656 | NA | other | downstream | 1777970 | 13703487 ~ 13739731 (+) |
