Gene
RNA
| Item | Value |
|---|---|
| gene id | G76247 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 11964524 ~ 11965309 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU86996 | True | 786 | lncRNA | 0.35 | 1 | 11964524 | 11965309 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_11932267_11962143 | NA | coding | upstream | 2316 | 11932267 ~ 11962208 (+) |
| CI01000012_11913513_11921468 | SGPL1 | coding | upstream | 42589 | 11913513 ~ 11921935 (+) |
| CI01000012_11897443_11903607 | PDLIM1 | coding | upstream | 60917 | 11897443 ~ 11903607 (+) |
| CI01000012_11874504_11884601 | REL | coding | upstream | 79232 | 11874504 ~ 11885292 (+) |
| CI01000012_11859839_11869022 | PAPOLG | coding | upstream | 93867 | 11859749 ~ 11870657 (+) |
| CI01000012_11981083_11993407 | RET | coding | downstream | 15774 | 11981083 ~ 11994093 (+) |
| CI01000012_11995593_12005292 | CGAT2, CSGALNACT2 | coding | downstream | 30284 | 11995593 ~ 12005352 (+) |
| CI01000012_12016924_12024791 | MCMBP | coding | downstream | 51615 | 12016924 ~ 12025035 (+) |
| CI01000012_12054427_12060390 | TIAL1 | coding | downstream | 89118 | 12054427 ~ 12060390 (+) |
| CI01000012_12128962_12130578 | ITPRIP | coding | downstream | 163137 | 12128446 ~ 12132127 (+) |
| G76198 | NA | non-coding | upstream | 39007 | 11920259 ~ 11925517 (+) |
| G76261 | NA | non-coding | upstream | 68325 | 11895999 ~ 11896199 (+) |
| G76181 | NA | non-coding | upstream | 122713 | 11840055 ~ 11841811 (+) |
| G76152 | NA | non-coding | upstream | 170306 | 11794011 ~ 11794218 (+) |
| G76151 | NA | non-coding | upstream | 172375 | 11791948 ~ 11792149 (+) |
| G76212 | NA | non-coding | downstream | 60534 | 12025843 ~ 12029190 (+) |
| G76236 | NA | non-coding | downstream | 64981 | 12030290 ~ 12031920 (+) |
| G76281 | NA | non-coding | downstream | 68494 | 12033803 ~ 12034004 (+) |
| G76238 | NA | non-coding | downstream | 69206 | 12034515 ~ 12035608 (+) |
| G76245 | NA | non-coding | downstream | 70581 | 12035890 ~ 12036924 (+) |
| G75533 | NA | other | upstream | 818785 | 11144817 ~ 11145739 (+) |
| CI01000012_10223957_10235955 | NA | other | upstream | 1740237 | 10223697 ~ 10236276 (+) |
| G73578 | NA | other | upstream | 3596897 | 8366806 ~ 8367627 (+) |
| CI01000012_07806089_07811902 | BEND3 | other | upstream | 4156669 | 7805248 ~ 7811902 (+) |
| CI01000012_05923216_05928055 | SRD5A2B | other | upstream | 6040219 | 5922385 ~ 5929186 (+) |
| G76385 | NA | other | downstream | 665446 | 12630755 ~ 12675666 (+) |
| G76374 | NA | other | downstream | 780222 | 12745531 ~ 12749169 (+) |
| CI01000012_13029637_13033226 | RGS17 | other | downstream | 1050197 | 13029435 ~ 13038899 (+) |
| G76645 | NA | other | downstream | 1686550 | 13651859 ~ 13652234 (+) |
| G76656 | NA | other | downstream | 1738178 | 13703487 ~ 13739731 (+) |
