Gene
RNA
| Item | Value |
|---|---|
| gene id | G76245 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 12035890 ~ 12036924 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU86994 | True | 1035 | lncRNA | 0.36 | 1 | 12035890 | 12036924 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_12016924_12024791 | MCMBP | coding | upstream | 10855 | 12016924 ~ 12025035 (+) |
| CI01000012_11995593_12005292 | CGAT2, CSGALNACT2 | coding | upstream | 30538 | 11995593 ~ 12005352 (+) |
| CI01000012_11981083_11993407 | RET | coding | upstream | 41797 | 11981083 ~ 11994093 (+) |
| CI01000012_11932267_11962143 | NA | coding | upstream | 73682 | 11932267 ~ 11962208 (+) |
| CI01000012_11913513_11921468 | SGPL1 | coding | upstream | 113955 | 11913513 ~ 11921935 (+) |
| CI01000012_12054427_12060390 | TIAL1 | coding | downstream | 17503 | 12054427 ~ 12060390 (+) |
| CI01000012_12128962_12130578 | ITPRIP | coding | downstream | 91522 | 12128446 ~ 12132127 (+) |
| CI01000012_12159352_12162539 | NA | coding | downstream | 121724 | 12158648 ~ 12162839 (+) |
| CI01000012_12173747_12212480 | VCLA, VCL | coding | downstream | 136464 | 12173388 ~ 12213285 (+) |
| CI01000012_12220568_12234927 | NA | coding | downstream | 183074 | 12219998 ~ 12235263 (+) |
| G76238 | NA | non-coding | upstream | 282 | 12034515 ~ 12035608 (+) |
| G76281 | NA | non-coding | upstream | 1886 | 12033803 ~ 12034004 (+) |
| G76236 | NA | non-coding | upstream | 3970 | 12030290 ~ 12031920 (+) |
| G76212 | NA | non-coding | upstream | 6700 | 12025843 ~ 12029190 (+) |
| G76247 | NA | non-coding | upstream | 70581 | 11964524 ~ 11965309 (+) |
| G76282 | NA | non-coding | downstream | 193 | 12037117 ~ 12037387 (+) |
| G76283 | NA | non-coding | downstream | 1608 | 12038532 ~ 12039038 (+) |
| G76284 | NA | non-coding | downstream | 3137 | 12040061 ~ 12040357 (+) |
| G76285 | NA | non-coding | downstream | 3994 | 12040918 ~ 12041350 (+) |
| G76286 | NA | non-coding | downstream | 4504 | 12041428 ~ 12041800 (+) |
| G75533 | NA | other | upstream | 890151 | 11144817 ~ 11145739 (+) |
| CI01000012_10223957_10235955 | NA | other | upstream | 1811603 | 10223697 ~ 10236276 (+) |
| G73578 | NA | other | upstream | 3668263 | 8366806 ~ 8367627 (+) |
| CI01000012_07806089_07811902 | BEND3 | other | upstream | 4228035 | 7805248 ~ 7811902 (+) |
| CI01000012_05923216_05928055 | SRD5A2B | other | upstream | 6111585 | 5922385 ~ 5929186 (+) |
| G76385 | NA | other | downstream | 593831 | 12630755 ~ 12675666 (+) |
| G76374 | NA | other | downstream | 708607 | 12745531 ~ 12749169 (+) |
| CI01000012_13029637_13033226 | RGS17 | other | downstream | 978582 | 13029435 ~ 13038899 (+) |
| G76645 | NA | other | downstream | 1614935 | 13651859 ~ 13652234 (+) |
| G76656 | NA | other | downstream | 1666563 | 13703487 ~ 13739731 (+) |
