G76282


Basic Information

Item Value
gene id G76282
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 12037117 ~ 12037387 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU87031
GAAACATGGATTTGCAGTTATCATTTTGTTAATATGTTGAATTTTGGGGTAAAATCATACCCTATATATTGTATTGTTATATACTGTATTGACAACTCATCGATTAAATAAAGTTTTAGAACCGGATGATATATATAACATTGATATAAGCGATCACCCAGATTTAGACCTATATAAAACGTTCACAGGCAAATTTGCTTTATGTATTTCCCTGGCGTCGAAATCAGGCACATATAAATGTCTGGAAACACAGTCCCTGGCTGCATGTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87031 True 271 lncRNA 0.33 1 12037117 12037387

Neighbor

gene id symbol gene type direction distance location
CI01000012_12016924_12024791 MCMBP coding upstream 12082 12016924 ~ 12025035 (+)
CI01000012_11995593_12005292 CGAT2, CSGALNACT2 coding upstream 31765 11995593 ~ 12005352 (+)
CI01000012_11981083_11993407 RET coding upstream 43024 11981083 ~ 11994093 (+)
CI01000012_11932267_11962143 NA coding upstream 74909 11932267 ~ 11962208 (+)
CI01000012_11913513_11921468 SGPL1 coding upstream 115182 11913513 ~ 11921935 (+)
CI01000012_12054427_12060390 TIAL1 coding downstream 17040 12054427 ~ 12060390 (+)
CI01000012_12128962_12130578 ITPRIP coding downstream 91059 12128446 ~ 12132127 (+)
CI01000012_12159352_12162539 NA coding downstream 121261 12158648 ~ 12162839 (+)
CI01000012_12173747_12212480 VCLA, VCL coding downstream 136001 12173388 ~ 12213285 (+)
CI01000012_12220568_12234927 NA coding downstream 182611 12219998 ~ 12235263 (+)
G76245 NA non-coding upstream 193 12035890 ~ 12036924 (+)
G76238 NA non-coding upstream 1509 12034515 ~ 12035608 (+)
G76281 NA non-coding upstream 3113 12033803 ~ 12034004 (+)
G76236 NA non-coding upstream 5197 12030290 ~ 12031920 (+)
G76212 NA non-coding upstream 7927 12025843 ~ 12029190 (+)
G76283 NA non-coding downstream 1145 12038532 ~ 12039038 (+)
G76284 NA non-coding downstream 2674 12040061 ~ 12040357 (+)
G76285 NA non-coding downstream 3531 12040918 ~ 12041350 (+)
G76286 NA non-coding downstream 4041 12041428 ~ 12041800 (+)
G76287 NA non-coding downstream 4645 12042032 ~ 12042311 (+)
G75533 NA other upstream 891378 11144817 ~ 11145739 (+)
CI01000012_10223957_10235955 NA other upstream 1812830 10223697 ~ 10236276 (+)
G73578 NA other upstream 3669490 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 4229262 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 6112812 5922385 ~ 5929186 (+)
G76385 NA other downstream 593368 12630755 ~ 12675666 (+)
G76374 NA other downstream 708144 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 978119 13029435 ~ 13038899 (+)
G76645 NA other downstream 1614472 13651859 ~ 13652234 (+)
G76656 NA other downstream 1666100 13703487 ~ 13739731 (+)

Expression


Co-expression Network