G76283


Basic Information

Item Value
gene id G76283
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 12038532 ~ 12039038 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU87032
ACATAATGATGGTGACTTGCAAAGCTGGTGCAAACATATCCACGTCGCTATGATCAGATGCTTTCTTAACTGCTGTTTTCTCACAGCTGTCATTTTTGTTGTGTTTCTTCTGTTACTGAGAGGAAAGTGTGCAGCACATATTTACATATTCATCTAAACATCGCTCTCAGCAGTGTGGGCAGCATCAGGACGTTCGTTAACAGTATATCGCTGCAAAGGTATTTTCAACTTCTTTTTATTTCTAAGCGAAGAACTAGAAAAAAGAATTTTGCCATGTGTATATCAAGGCCTTGAATCAAGTTCAGTCTCTTATACGTTATGTTTGTGAGAGTGCGAGAACAAGCAACATGTTTTATTGTTTGCTGCAGTTTCACTTAACGGCCACCTGTGTCACTAATAACAGGGTTACTGAATTCTACATATAGCCCCTTTAAAGGATGTTCATTTCTGAATGAAATTTTTTCTGATAATTTACTCACACACTTCTTTTCAAATGTAGACGTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87032 True 507 lncRNA 0.37 1 12038532 12039038

Neighbor

gene id symbol gene type direction distance location
CI01000012_12016924_12024791 MCMBP coding upstream 13497 12016924 ~ 12025035 (+)
CI01000012_11995593_12005292 CGAT2, CSGALNACT2 coding upstream 33180 11995593 ~ 12005352 (+)
CI01000012_11981083_11993407 RET coding upstream 44439 11981083 ~ 11994093 (+)
CI01000012_11932267_11962143 NA coding upstream 76324 11932267 ~ 11962208 (+)
CI01000012_11913513_11921468 SGPL1 coding upstream 116597 11913513 ~ 11921935 (+)
CI01000012_12054427_12060390 TIAL1 coding downstream 15389 12054427 ~ 12060390 (+)
CI01000012_12128962_12130578 ITPRIP coding downstream 89408 12128446 ~ 12132127 (+)
CI01000012_12159352_12162539 NA coding downstream 119610 12158648 ~ 12162839 (+)
CI01000012_12173747_12212480 VCLA, VCL coding downstream 134350 12173388 ~ 12213285 (+)
CI01000012_12220568_12234927 NA coding downstream 180960 12219998 ~ 12235263 (+)
G76282 NA non-coding upstream 1145 12037117 ~ 12037387 (+)
G76245 NA non-coding upstream 1608 12035890 ~ 12036924 (+)
G76238 NA non-coding upstream 2924 12034515 ~ 12035608 (+)
G76281 NA non-coding upstream 4528 12033803 ~ 12034004 (+)
G76236 NA non-coding upstream 6612 12030290 ~ 12031920 (+)
G76284 NA non-coding downstream 1023 12040061 ~ 12040357 (+)
G76285 NA non-coding downstream 1880 12040918 ~ 12041350 (+)
G76286 NA non-coding downstream 2390 12041428 ~ 12041800 (+)
G76287 NA non-coding downstream 2994 12042032 ~ 12042311 (+)
G76288 NA non-coding downstream 3327 12042365 ~ 12042579 (+)
G75533 NA other upstream 892793 11144817 ~ 11145739 (+)
CI01000012_10223957_10235955 NA other upstream 1814245 10223697 ~ 10236276 (+)
G73578 NA other upstream 3670905 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 4230677 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 6114227 5922385 ~ 5929186 (+)
G76385 NA other downstream 591717 12630755 ~ 12675666 (+)
G76374 NA other downstream 706493 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 976468 13029435 ~ 13038899 (+)
G76645 NA other downstream 1612821 13651859 ~ 13652234 (+)
G76656 NA other downstream 1664449 13703487 ~ 13739731 (+)

Expression


Co-expression Network