G76288


Basic Information

Item Value
gene id G76288
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 12042365 ~ 12042579 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU87037
TGGTTGAGCATGCAAACCTTTTTGTAAAAAACGAAACAAAAAAACAAAAACAAAAAAGTCTACAAAAAAATATTTCTAGTAAACACATTTTTGTCATTTCTGATAAAAGGCATACGATGCATAAAATACACAAGCGATGTCAAAACTGCCTGAGGTTAAAGAAGCGCATCGGAACCTAGTACTTTATTGGTTTAAGGCCTGGGGAGAAAACTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87037 True 215 lncRNA 0.33 1 12042365 12042579

Neighbor

gene id symbol gene type direction distance location
CI01000012_12016924_12024791 MCMBP coding upstream 17330 12016924 ~ 12025035 (+)
CI01000012_11995593_12005292 CGAT2, CSGALNACT2 coding upstream 37013 11995593 ~ 12005352 (+)
CI01000012_11981083_11993407 RET coding upstream 48272 11981083 ~ 11994093 (+)
CI01000012_11932267_11962143 NA coding upstream 80157 11932267 ~ 11962208 (+)
CI01000012_11913513_11921468 SGPL1 coding upstream 120430 11913513 ~ 11921935 (+)
CI01000012_12054427_12060390 TIAL1 coding downstream 11848 12054427 ~ 12060390 (+)
CI01000012_12128962_12130578 ITPRIP coding downstream 85867 12128446 ~ 12132127 (+)
CI01000012_12159352_12162539 NA coding downstream 116069 12158648 ~ 12162839 (+)
CI01000012_12173747_12212480 VCLA, VCL coding downstream 130809 12173388 ~ 12213285 (+)
CI01000012_12220568_12234927 NA coding downstream 177419 12219998 ~ 12235263 (+)
G76287 NA non-coding upstream 54 12042032 ~ 12042311 (+)
G76286 NA non-coding upstream 565 12041428 ~ 12041800 (+)
G76285 NA non-coding upstream 1015 12040918 ~ 12041350 (+)
G76284 NA non-coding upstream 2008 12040061 ~ 12040357 (+)
G76283 NA non-coding upstream 3327 12038532 ~ 12039038 (+)
G76289 NA non-coding downstream 304 12042883 ~ 12043162 (+)
G76220 NA non-coding downstream 1200 12043779 ~ 12044185 (+)
G76290 NA non-coding downstream 2498 12045077 ~ 12045313 (+)
G76293 NA non-coding downstream 26259 12068838 ~ 12069166 (+)
G76299 NA non-coding downstream 34331 12076910 ~ 12077124 (+)
G75533 NA other upstream 896626 11144817 ~ 11145739 (+)
CI01000012_10223957_10235955 NA other upstream 1818078 10223697 ~ 10236276 (+)
G73578 NA other upstream 3674738 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 4234510 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 6118060 5922385 ~ 5929186 (+)
G76385 NA other downstream 588176 12630755 ~ 12675666 (+)
G76374 NA other downstream 702952 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 972927 13029435 ~ 13038899 (+)
G76645 NA other downstream 1609280 13651859 ~ 13652234 (+)
G76656 NA other downstream 1660908 13703487 ~ 13739731 (+)

Expression


Co-expression Network