G76220


Basic Information

Item Value
gene id G76220
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 12043779 ~ 12044185 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU86969
CACGGATCCATCCTTCCTGCTGCACCACAGCGCGTTATCTCCGCTCTGGAGAATATAATGATCTTTAGCTTGAAACAGCTCCATGTTTATCATAATACCAAAACATAAGAGCGTCCCGATACTAAACCGCTGGATTTGTTCCCGAACGGAAAAACGAGGAAATGAAGCTGCTCCCTTATCGTCCACTGGCAATCCAAATAGACGCCAGCTAACCTGCTAGCTCTGTACCTGTGTAAACGTTTATAATAATCTGATAAAGCATCGTGCCTCTATGTCAGGTACTGGCCGATCATCGAAAATGGATCCTCTGCGAATTTAATGTCAGTTTAGTAAGTGCGATATTATAGTAGTGGTTCGGAAATGTACCGGTCTGTCTAATATTTTCCACTGAGGGGAGCAGCAGCGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU86969 True 407 lncRNA 0.45 1 12043779 12044185

Neighbor

gene id symbol gene type direction distance location
CI01000012_12016924_12024791 MCMBP coding upstream 18744 12016924 ~ 12025035 (+)
CI01000012_11995593_12005292 CGAT2, CSGALNACT2 coding upstream 38427 11995593 ~ 12005352 (+)
CI01000012_11981083_11993407 RET coding upstream 49686 11981083 ~ 11994093 (+)
CI01000012_11932267_11962143 NA coding upstream 81571 11932267 ~ 11962208 (+)
CI01000012_11913513_11921468 SGPL1 coding upstream 121844 11913513 ~ 11921935 (+)
CI01000012_12054427_12060390 TIAL1 coding downstream 10242 12054427 ~ 12060390 (+)
CI01000012_12128962_12130578 ITPRIP coding downstream 84261 12128446 ~ 12132127 (+)
CI01000012_12159352_12162539 NA coding downstream 114463 12158648 ~ 12162839 (+)
CI01000012_12173747_12212480 VCLA, VCL coding downstream 129203 12173388 ~ 12213285 (+)
CI01000012_12220568_12234927 NA coding downstream 175813 12219998 ~ 12235263 (+)
G76289 NA non-coding upstream 617 12042883 ~ 12043162 (+)
G76288 NA non-coding upstream 1200 12042365 ~ 12042579 (+)
G76287 NA non-coding upstream 1468 12042032 ~ 12042311 (+)
G76286 NA non-coding upstream 1979 12041428 ~ 12041800 (+)
G76285 NA non-coding upstream 2429 12040918 ~ 12041350 (+)
G76290 NA non-coding downstream 892 12045077 ~ 12045313 (+)
G76293 NA non-coding downstream 24653 12068838 ~ 12069166 (+)
G76299 NA non-coding downstream 32725 12076910 ~ 12077124 (+)
G76306 NA non-coding downstream 66242 12110427 ~ 12110646 (+)
G76315 NA non-coding downstream 119998 12164183 ~ 12164411 (+)
G75533 NA other upstream 898040 11144817 ~ 11145739 (+)
CI01000012_10223957_10235955 NA other upstream 1819492 10223697 ~ 10236276 (+)
G73578 NA other upstream 3676152 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 4235924 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 6119474 5922385 ~ 5929186 (+)
G76385 NA other downstream 586570 12630755 ~ 12675666 (+)
G76374 NA other downstream 701346 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 971321 13029435 ~ 13038899 (+)
G76645 NA other downstream 1607674 13651859 ~ 13652234 (+)
G76656 NA other downstream 1659302 13703487 ~ 13739731 (+)

Expression


Co-expression Network