G76299


Basic Information

Item Value
gene id G76299
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 12076910 ~ 12077124 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU87048
CACGCGTCTTATTCGTGTTGTGCTGCAACTTTTTTTATTACTTTGTGATAAATATCGCCATCTATCGTCCATTAAAAACACTGCAAACTACCAAGGTTACCACACTTATTCTTGCTACATAAATAGGTGTTGTGGTGGGGTTTTTTTTGTTTTGTTTTGTTTTTTAAACATTTTTGTTAACTTTTTTGAGAATATTTTCAGTTATTTTTTAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87048 True 215 lncRNA 0.30 1 12076910 12077124

Neighbor

gene id symbol gene type direction distance location
CI01000012_12054427_12060390 TIAL1 coding upstream 16520 12054427 ~ 12060390 (+)
CI01000012_12016924_12024791 MCMBP coding upstream 51875 12016924 ~ 12025035 (+)
CI01000012_11995593_12005292 CGAT2, CSGALNACT2 coding upstream 71558 11995593 ~ 12005352 (+)
CI01000012_11981083_11993407 RET coding upstream 82817 11981083 ~ 11994093 (+)
CI01000012_11932267_11962143 NA coding upstream 114702 11932267 ~ 11962208 (+)
CI01000012_12128962_12130578 ITPRIP coding downstream 51322 12128446 ~ 12132127 (+)
CI01000012_12159352_12162539 NA coding downstream 81524 12158648 ~ 12162839 (+)
CI01000012_12173747_12212480 VCLA, VCL coding downstream 96264 12173388 ~ 12213285 (+)
CI01000012_12220568_12234927 NA coding downstream 142874 12219998 ~ 12235263 (+)
CI01000012_12270454_12276521 NA coding downstream 193222 12270346 ~ 12276625 (+)
G76293 NA non-coding upstream 7744 12068838 ~ 12069166 (+)
G76290 NA non-coding upstream 31597 12045077 ~ 12045313 (+)
G76220 NA non-coding upstream 32725 12043779 ~ 12044185 (+)
G76289 NA non-coding upstream 33748 12042883 ~ 12043162 (+)
G76288 NA non-coding upstream 34331 12042365 ~ 12042579 (+)
G76306 NA non-coding downstream 33303 12110427 ~ 12110646 (+)
G76315 NA non-coding downstream 87059 12164183 ~ 12164411 (+)
G76316 NA non-coding downstream 87837 12164961 ~ 12165232 (+)
G76318 NA non-coding downstream 91044 12168168 ~ 12168455 (+)
G76327 NA non-coding downstream 355775 12432899 ~ 12433158 (+)
G75533 NA other upstream 931171 11144817 ~ 11145739 (+)
CI01000012_10223957_10235955 NA other upstream 1852623 10223697 ~ 10236276 (+)
G73578 NA other upstream 3709283 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 4269055 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 6152605 5922385 ~ 5929186 (+)
G76385 NA other downstream 553631 12630755 ~ 12675666 (+)
G76374 NA other downstream 668407 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 938382 13029435 ~ 13038899 (+)
G76645 NA other downstream 1574735 13651859 ~ 13652234 (+)
G76656 NA other downstream 1626363 13703487 ~ 13739731 (+)

Expression


Co-expression Network