Gene
RNA
| Item | Value |
|---|---|
| gene id | G77198 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 12908629 ~ 12908909 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: ras/Rap GTPase-activating protein SynGAP isoform X7 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU88044 | True | 281 | lncRNA | 0.30 | 1 | 12908629 | 12908909 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_12902396_12904687 | AGT | coding | downstream | 3008 | 12902161 ~ 12905621 (-) |
| CI01000012_12872801_12891084 | PGBD5 | coding | downstream | 17545 | 12871862 ~ 12891084 (-) |
| CI01000012_12811846_12819195 | NA | coding | downstream | 89268 | 12811734 ~ 12819361 (-) |
| CI01000012_12783994_12795809 | NA | coding | downstream | 112060 | 12783924 ~ 12796569 (-) |
| CI01000012_12751670_12759821 | ABCB10 | coding | downstream | 148808 | 12751273 ~ 12759821 (-) |
| CI01000012_12954694_12954954 | SF3B5, BRAFLDRAFT_284483 | coding | upstream | 45551 | 12954446 ~ 12957833 (-) |
| CI01000012_12960774_12964242 | OPRM1 | coding | upstream | 50792 | 12959701 ~ 12964929 (-) |
| CI01000012_12977279_12978570 | NA | coding | upstream | 68113 | 12977022 ~ 12978817 (-) |
| CI01000012_13015424_13018020 | NA | coding | upstream | 106465 | 13015374 ~ 13019645 (-) |
| CI01000012_13041401_13060443 | PCNXL2 | coding | upstream | 131743 | 13040652 ~ 13060443 (-) |
| G76975 | NA | non-coding | downstream | 6952 | 12900414 ~ 12901677 (-) |
| G76982 | NA | non-coding | downstream | 9270 | 12898355 ~ 12899359 (-) |
| G77149 | NA | non-coding | downstream | 127572 | 12780760 ~ 12781057 (-) |
| G77134 | NA | non-coding | downstream | 189442 | 12718946 ~ 12719187 (-) |
| G77128 | NA | non-coding | downstream | 203077 | 12705339 ~ 12705552 (-) |
| G77200 | NA | non-coding | upstream | 3939 | 12912848 ~ 12913111 (-) |
| G77201 | NA | non-coding | upstream | 4789 | 12913698 ~ 12913923 (-) |
| G77202 | NA | non-coding | upstream | 7522 | 12916431 ~ 12916673 (-) |
| G77205 | NA | non-coding | upstream | 10023 | 12918932 ~ 12919313 (-) |
| G77207 | NA | non-coding | upstream | 12669 | 12921578 ~ 12921802 (-) |
| CI01000012_12079581_12084139 | NA | other | downstream | 824369 | 12078936 ~ 12084260 (-) |
| CI01000012_12047175_12052116 | NA | other | downstream | 856422 | 12046728 ~ 12052541 (-) |
| G75608 | NA | other | downstream | 2287758 | 10611915 ~ 10620871 (-) |
| G74982 | NA | other | downstream | 3332657 | 9575648 ~ 9576149 (-) |
| CI01000012_09400481_09401810 | EIF4EBP2 | other | downstream | 3506661 | 9398076 ~ 9402378 (-) |
| G77287 | NA | other | upstream | 710367 | 13619276 ~ 13633819 (-) |
