XLOC_000768


Basic Information

Item Value
gene id XLOC_000768
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 56416638 ~ 56556305 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003237
AATCTCCCGAGTCTGATGACCAGCAGAAACACATGAGGACCAGGAACAGACATCTCTACACACTTCGTTATTTCCTCCTTCATTTCTGGTTCTGTCAGTGTTGAATCCAACAGTCCGGGGGTGTCGATGACGGAGATCTTCTTTCCATTAATCTCTGCTTCTCCTCTCTCACAGGTTTTAGTGACTGACACCACTGAAGCCTTACTCTTGAACTTCTTCTGGCCCAGGATGGTGTTTCCGGCTGAACTTTTTCCTGATCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003237 True 260 lncRNA 0.47 3 56416638 56556305

Neighbor

gene id symbol gene type direction distance location
XLOC_000767 c3a.3 coding upstream 96069 56274613 ~ 56320569 (+)
XLOC_000766 c3a.2 coding upstream 149907 56229674 ~ 56266731 (+)
XLOC_000765 crb3b coding upstream 231710 56180416 ~ 56184928 (+)
XLOC_000764 tecrb coding upstream 639484 55752593 ~ 55777154 (+)
XLOC_000763 adgre10 coding upstream 669635 55730205 ~ 55747003 (+)
XLOC_000772 NA coding downstream 4921 56561226 ~ 56604352 (+)
XLOC_000773 NA coding downstream 6522 56562827 ~ 56564352 (+)
XLOC_000774 NA coding downstream 13209 56569514 ~ 56603810 (+)
XLOC_000775 NA coding downstream 103892 56660197 ~ 56662651 (+)
XLOC_000776 NA coding downstream 112853 56669158 ~ 56683634 (+)
XLOC_000760 NA non-coding upstream 687512 55714918 ~ 55729126 (+)
XLOC_000761 NA non-coding upstream 695223 55717578 ~ 55721415 (+)
XLOC_000758 NA non-coding upstream 737191 55678912 ~ 55679447 (+)
XLOC_000748 NA non-coding upstream 977363 55437572 ~ 55439275 (+)
XLOC_000747 NA non-coding upstream 1023606 55392380 ~ 55393032 (+)
XLOC_000745 NA non-coding upstream 939503 55370138 ~ 55477135 (+)

Expression


Co-expression Network