Gene
RNA
| Item | Value |
|---|---|
| gene id | G77349 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 13171136 ~ 13171361 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: sigma non-opioid intracellular receptor 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU88217 | True | 226 | lncRNA | 0.23 | 1 | 13171136 | 13171361 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_13085906_13090647 | NA | coding | downstream | 80483 | 13084117 ~ 13090653 (-) |
| CI01000012_13041401_13060443 | PCNXL2 | coding | downstream | 110693 | 13040652 ~ 13060443 (-) |
| CI01000012_13015424_13018020 | NA | coding | downstream | 151491 | 13015374 ~ 13019645 (-) |
| CI01000012_12977279_12978570 | NA | coding | downstream | 192319 | 12977022 ~ 12978817 (-) |
| CI01000012_12960774_12964242 | OPRM1 | coding | downstream | 206207 | 12959701 ~ 12964929 (-) |
| CI01000012_13231532_13268248 | KHDRBS2 | coding | upstream | 60171 | 13231532 ~ 13268248 (-) |
| CI01000012_13277959_13281157 | NA | coding | upstream | 106416 | 13277777 ~ 13282518 (-) |
| CI01000012_13324234_13357963 | SORBS1 | coding | upstream | 152448 | 13323809 ~ 13357963 (-) |
| CI01000012_13374979_13384349 | NA | coding | upstream | 203449 | 13374810 ~ 13384349 (-) |
| CI01000012_13459355_13464706 | TACR2 | coding | upstream | 287300 | 13458661 ~ 13465823 (-) |
| G77348 | NA | non-coding | downstream | 666 | 13170143 ~ 13170470 (-) |
| G77256 | NA | non-coding | downstream | 73444 | 13097387 ~ 13097692 (-) |
| G77254 | NA | non-coding | downstream | 76638 | 13094280 ~ 13094498 (-) |
| G77241 | NA | non-coding | downstream | 87202 | 13081991 ~ 13083934 (-) |
| G77243 | NA | non-coding | downstream | 108803 | 13061905 ~ 13062333 (-) |
| G77350 | NA | non-coding | upstream | 1702 | 13173063 ~ 13173303 (-) |
| G77352 | NA | non-coding | upstream | 4486 | 13175847 ~ 13176084 (-) |
| G77353 | NA | non-coding | upstream | 6966 | 13178327 ~ 13178571 (-) |
| G77354 | NA | non-coding | upstream | 8679 | 13180040 ~ 13180268 (-) |
| G77316 | NA | non-coding | upstream | 77170 | 13248531 ~ 13252554 (-) |
| CI01000012_12954694_12954954 | SF3B5, BRAFLDRAFT_284483 | other | downstream | 215472 | 12954446 ~ 12957833 (-) |
| CI01000012_12079581_12084139 | NA | other | downstream | 1086876 | 12078936 ~ 12084260 (-) |
| CI01000012_12047175_12052116 | NA | other | downstream | 1118929 | 12046728 ~ 12052541 (-) |
| G75608 | NA | other | downstream | 2550265 | 10611915 ~ 10620871 (-) |
| G74982 | NA | other | downstream | 3595164 | 9575648 ~ 9576149 (-) |
| G77287 | NA | other | upstream | 447915 | 13619276 ~ 13633819 (-) |
