Gene
RNA
| Item | Value |
|---|---|
| gene id | G77354 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 13180040 ~ 13180268 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU88222 | True | 229 | lncRNA | 0.36 | 1 | 13180040 | 13180268 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_13085906_13090647 | NA | coding | downstream | 89387 | 13084117 ~ 13090653 (-) |
| CI01000012_13041401_13060443 | PCNXL2 | coding | downstream | 119597 | 13040652 ~ 13060443 (-) |
| CI01000012_13015424_13018020 | NA | coding | downstream | 160395 | 13015374 ~ 13019645 (-) |
| CI01000012_12977279_12978570 | NA | coding | downstream | 201223 | 12977022 ~ 12978817 (-) |
| CI01000012_12960774_12964242 | OPRM1 | coding | downstream | 215111 | 12959701 ~ 12964929 (-) |
| CI01000012_13231532_13268248 | KHDRBS2 | coding | upstream | 51264 | 13231532 ~ 13268248 (-) |
| CI01000012_13277959_13281157 | NA | coding | upstream | 97509 | 13277777 ~ 13282518 (-) |
| CI01000012_13324234_13357963 | SORBS1 | coding | upstream | 143541 | 13323809 ~ 13357963 (-) |
| CI01000012_13374979_13384349 | NA | coding | upstream | 194542 | 13374810 ~ 13384349 (-) |
| CI01000012_13459355_13464706 | TACR2 | coding | upstream | 278393 | 13458661 ~ 13465823 (-) |
| G77353 | NA | non-coding | downstream | 1469 | 13178327 ~ 13178571 (-) |
| G77352 | NA | non-coding | downstream | 3956 | 13175847 ~ 13176084 (-) |
| G77350 | NA | non-coding | downstream | 6737 | 13173063 ~ 13173303 (-) |
| G77349 | NA | non-coding | downstream | 8679 | 13171136 ~ 13171361 (-) |
| G77348 | NA | non-coding | downstream | 9570 | 13170143 ~ 13170470 (-) |
| G77316 | NA | non-coding | upstream | 68263 | 13248531 ~ 13252554 (-) |
| G77282 | NA | non-coding | upstream | 224103 | 13404371 ~ 13408213 (-) |
| G77289 | NA | non-coding | upstream | 271738 | 13452006 ~ 13453470 (-) |
| G77393 | NA | non-coding | upstream | 304795 | 13485063 ~ 13485319 (-) |
| G77315 | NA | non-coding | upstream | 305268 | 13485536 ~ 13486220 (-) |
| CI01000012_12954694_12954954 | SF3B5, BRAFLDRAFT_284483 | other | downstream | 224376 | 12954446 ~ 12957833 (-) |
| CI01000012_12079581_12084139 | NA | other | downstream | 1095780 | 12078936 ~ 12084260 (-) |
| CI01000012_12047175_12052116 | NA | other | downstream | 1127833 | 12046728 ~ 12052541 (-) |
| G75608 | NA | other | downstream | 2559169 | 10611915 ~ 10620871 (-) |
| G74982 | NA | other | downstream | 3604068 | 9575648 ~ 9576149 (-) |
| G77287 | NA | other | upstream | 439008 | 13619276 ~ 13633819 (-) |
