Gene
RNA
| Item | Value |
|---|---|
| gene id | G77315 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 13485536 ~ 13486220 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU88183 | True | 685 | lncRNA | 0.29 | 1 | 13485536 | 13486220 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_13459355_13464706 | TACR2 | coding | downstream | 19713 | 13458661 ~ 13465823 (-) |
| CI01000012_13374979_13384349 | NA | coding | downstream | 101187 | 13374810 ~ 13384349 (-) |
| CI01000012_13324234_13357963 | SORBS1 | coding | downstream | 127573 | 13323809 ~ 13357963 (-) |
| CI01000012_13277959_13281157 | NA | coding | downstream | 203018 | 13277777 ~ 13282518 (-) |
| CI01000012_13231532_13268248 | KHDRBS2 | coding | downstream | 217288 | 13231532 ~ 13268248 (-) |
| CI01000012_13512129_13512368 | NA | coding | upstream | 25860 | 13512080 ~ 13512368 (-) |
| CI01000012_13516097_13520943 | HNRNPH3 | coding | upstream | 29299 | 13515519 ~ 13520943 (-) |
| CI01000012_13538979_13549803 | NA | coding | upstream | 52459 | 13538679 ~ 13549803 (-) |
| CI01000012_13590555_13590800 | NA | coding | upstream | 104302 | 13590522 ~ 13590800 (-) |
| CI01000012_13593620_13605408 | NFKB2 | coding | upstream | 107381 | 13593601 ~ 13605988 (-) |
| G77393 | NA | non-coding | downstream | 217 | 13485063 ~ 13485319 (-) |
| G77289 | NA | non-coding | downstream | 32066 | 13452006 ~ 13453470 (-) |
| G77282 | NA | non-coding | downstream | 77323 | 13404371 ~ 13408213 (-) |
| G77316 | NA | non-coding | downstream | 232982 | 13248531 ~ 13252554 (-) |
| G77354 | NA | non-coding | downstream | 305268 | 13180040 ~ 13180268 (-) |
| G77407 | NA | non-coding | upstream | 65032 | 13551252 ~ 13551585 (-) |
| G77409 | NA | non-coding | upstream | 67254 | 13553474 ~ 13553762 (-) |
| G77423 | NA | non-coding | upstream | 94614 | 13580834 ~ 13585383 (-) |
| G77424 | NA | non-coding | upstream | 99286 | 13585506 ~ 13587552 (-) |
| G77447 | NA | non-coding | upstream | 238677 | 13724897 ~ 13726271 (-) |
| CI01000012_12954694_12954954 | SF3B5, BRAFLDRAFT_284483 | other | downstream | 529872 | 12954446 ~ 12957833 (-) |
| CI01000012_12079581_12084139 | NA | other | downstream | 1401276 | 12078936 ~ 12084260 (-) |
| CI01000012_12047175_12052116 | NA | other | downstream | 1433329 | 12046728 ~ 12052541 (-) |
| G75608 | NA | other | downstream | 2864665 | 10611915 ~ 10620871 (-) |
| G74982 | NA | other | downstream | 3909564 | 9575648 ~ 9576149 (-) |
| G77287 | NA | other | upstream | 133056 | 13619276 ~ 13633819 (-) |
