G76629


Basic Information

Item Value
gene id G76629
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 13555993 ~ 13556230 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU87417
GTAAATTCACAACCTTTATATACAGTAGGCATGTGCAATATATGCTGAAAAAGGAGTCATAATGCTGTTAAAAGGTTAATTAAAAGGTTTAACAAGCCTAGATTCAATGTGCATCACAAGTTATTTTCAGCATTTAAAGGGATAGTCCACCCCCCAAAAAATCATTTTTCATCATTTACTCACCCTCATGTCATTCTAAACTTGTATGACCGACTATCTTCTGTGGAATAACATTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU87417 True 238 lncRNA 0.34 1 13555993 13556230

Neighbor

gene id symbol gene type direction distance location
CI01000012_13551086_13554035 NA coding upstream 1681 13550773 ~ 13554312 (+)
CI01000012_13533459_13538332 PBLD2, PBLD coding upstream 17550 13533390 ~ 13538443 (+)
CI01000012_13527966_13529695 PBLDP, PBLD coding upstream 26231 13527184 ~ 13529762 (+)
CI01000012_13522084_13525252 PBLD2, PBLD coding upstream 30674 13522084 ~ 13525319 (+)
CI01000012_13498541_13510228 RUFY2 coding upstream 45728 13498541 ~ 13510265 (+)
CI01000012_13559514_13590448 PSD coding downstream 3284 13559514 ~ 13590493 (+)
CI01000012_13619458_13633023 GDH1, GLUD1B, GLUD1A, GDH2, GDH3.2, GLUD1, GDH03, GDH01, GLUD1.S coding downstream 62779 13619009 ~ 13633801 (+)
CI01000012_13653033_13672573 NA coding downstream 96803 13653033 ~ 13672988 (+)
G76594 NA non-coding upstream 16814 13538521 ~ 13539179 (+)
G76600 NA non-coding upstream 34675 13520992 ~ 13521318 (+)
CI01000012_13471010_13484053 TSPAN15 non-coding upstream 69773 13471010 ~ 13486220 (+)
CI01000012_13442338_13442897 NA non-coding upstream 114329 13440853 ~ 13443219 (+)
G76630 NA non-coding downstream 1195 13557425 ~ 13557687 (+)
G76584 NA non-coding downstream 35269 13591499 ~ 13593268 (+)
G76657 NA non-coding downstream 142657 13698887 ~ 13701764 (+)
G76656 NA non-coding downstream 182943 13703487 ~ 13739731 (+)
G76669 NA non-coding downstream 188687 13744917 ~ 13745623 (+)
CI01000012_13029637_13033226 RGS17 other upstream 517094 13029435 ~ 13038899 (+)
G76374 NA other upstream 806824 12745531 ~ 12749169 (+)
G76385 NA other upstream 880327 12630755 ~ 12675666 (+)
G75533 NA other upstream 2410254 11144817 ~ 11145739 (+)
CI01000012_10223957_10235955 NA other upstream 3331706 10223697 ~ 10236276 (+)
G76645 NA other downstream 95629 13651859 ~ 13652234 (+)

Expression


Co-expression Network