G77423


Basic Information

Item Value
gene id G77423
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 13580834 ~ 13585383 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU88295
AAGGATTCTATAATGGGCTTACACCATTTTTAAATCAATAACACTTTTAGAGGCACTGAATTATTTTCAAATGTTTTGGATGACACTGGATAAGGAGAATGGTGCTCTTGAATCTGATGCACTGAAAAAGAGCCACTAGGGAAAACATTAGACTTACATTGTCCACTGCAGCTTTTCATTTTTGATAGAGTTGTAGAGAGCCTTTTTTTTGCGGGTTTGTGGGTGGTTTTGTCCGTCCTGAACCTTGCCAAGCAGATCAGGGAAGGCCAGGGGCTTTAAGGAACGTGAGCGAGGTGCTTTGGTGTAACGAAACGGGTCCATCACGCTGAAGTCGCGTCCACATCGCACCGAACACAGGGAGCGAGAGCGGAGACGGCCAGTGGAGTGAATACTGTTTACACCAATCATGATTTTGGTAGATACAGAATCCAGAGATGAGGAAACAGTAAAAAGAAAGCTTTAAAATCAAACAATGTTCAAGTAAACTATATGGAGTCCTCATTCACTTGACATCTATCTTCTACCAGCAGAATCTAGACCGGCAGGAGTGATCAGGAGAAACGAGTTCAAAGAGCATGTCGAATGATACAGTGGCAAAATCAAAGTCTTTGGCAGTGGCGAAGCTCTTTGGGAGATCCTTAAGGGTGTCACATGGGCATCAGGCCTTCCGTAGTGACTCCAACTCTTGCATTATGGATCCATTCCTATTCATTATGCATGTAAAAACATTGCTGGGCCACTGCAAATCCACCAGCGCCATTTTGCATAAAACTTTCTGCTTTGACTGAAAGACCGAAGACGATCAAGGAAGAGGATCTGCGGTTAACATCCAGTTGTTTCCTCGTATACATCCTCGAGTTTATCACACCTACACGTGTTCACCAACGCACGCTGAAACGCTCACAGGTGCGGCGCAGATGGCTCGCGAGGACCGCAATGGTGGAAGGAGATAATTGGAGAGAAGAGGACAGACGGAGGAATGCGAAACATCATTGAAGCAAATGCATGAAATAAACACACATGGGCTCATGCAGGGAACAGACTGAGAGGGTCTGACTTCCACCCACTCTCAAACTGGCATCCCAAAACTGTGACGTCACCTAGCGTCCCCCTCTGGGACGGAAAAATAGATATCAGACGTGTGAGAGACAGAAGGACGAGACTAGAGCAGGAAATCAGCAAAGAAACGAGATGGTCCTGTTGCTTTGTGCAGTTTTCTCTATTCCATGTCAAACGGTTGAATGTATTAGAAGTTGTCCACAATTCTCTTTCATCCCTTTCTTTTTTTCCCCCCTTCTTCTTTGAGCTTGTGTCCTCACGCCCGTTATCCAATTTGCAGATTCTTTCACACCCTTCCACAAAACACAGCTTTGCTGCACGGCTGTAGGAACAATAGAGGTTTGGCGTCCGAGTTCTGCGCTCTCTTTTCTTCTTCTCCTCACAGTCTTGTTCCTCCTCCGTGCTGCAGATAAAAAATGGGCTGTGCAGTGAGAATGAGATCTTGTGAGCGAGGAGTGCTCACCCTCCCATCTCTCTCTTGCATTCACAATCTCGGCTGATCTCTTTTACTGTCTCTCTCGCGCTCTGC
>TU88296
GGCAAATCTAAAAAATTTTAGATTTAAGATTAAAATGTGAAACTTCAAGAAAGATATACTCCTAAAAACAAGTCTTAATATTTTGTCAATAATTCACAGTTTCTTAGTTGCATGTTGTTTTGAGATATTTAGATATTTGATATTATTTTACTGGAAAATAAAACAAGAATATTCTTCTCTCATTTTCTAAACTACAATCATTTTTTAAGTGAAAGTGACAGTGAAATGAAGTGTGCCCAAGTATGGTCCCATACTCGGAATTTGTGCTCTGCATTTCACCCATCCAAGTGCACACACACACAGTAGTGAACACACACGCCGTGAACACACACCCGTTTTTTGCTGCGGCGCCCGGGGAGCAGTTGGAGGTTAGGTGCCTTGCTCTAGGGCACCTCAGTTGTAGGTAATGAGAGTGGAAGAGAGCGCTGTTCATTCACTCCCCCCACCTACATTTCCTGCCGGAACTGAGACTCGAACCCACAACCTTCAGGTTATAAGTCTGACTCTCTAACCATTAGACCTCAACTGCCCCCTTATTTAGAATAAGGCAGTAATAAATAGACTAATACATTAATAGATGAAATAAAAGGCTGTATTTGAGGGAAGGCTTACTTTTCTTGCCATCAGTATCAGCATGAACTTTCCGCACAAGAAAGCCGTCGTTGTAGACCTGAGCACTGGACTGCAGTGCAACACTGACAAGGGGGTTTCCTCCACTGTTGATCCGCTTCATAGTGTGCGATGCAGAGTCTTTCCTGCCGTCCAGCTCAGAGAAAGATTTGCGCAGTTCCTCCTCATCGATTGTCCACTGCAGCTTTTCATTTTTGATAGAGTTGTAGAGAGCCTTTTTTTTGCGGGTTTGTGGGTGGTTTTGTCCGTCCTGAACCTTGCCAAGCAGATCAGGGAAGGCCAGGGGCTTTAAGGAACGTGAGCGAGGTGCTTTGGTGTAACGAAACGGGTCCATCACGCTGAAGTCGCGTCCACATCGCACCGAACACAGGGAGCGAGAGCGGAGACGGCCAGTGGAGTGAATACTGTTTACACCAATCATGATTTTGGTAGATACAGAATCCAGAGATGAGGAAACAGTAAAAAGAAAGCTTTAAAATCAAACAATGTTCAAGTAAACTATATGGAGTCCTCATTCACTTGACATCTATCTTCTACCAGCAGAATCTAGACCGGCAGGAGTGATCAGGAGAAACGAGTTCAAAGAGCATGTCGAATGATACAGTGGCAAAATCAAAGTCTTTGGCAGTGGCGAAGCTCTTTGGGAGATCCTTAAGGGTGTCACATGGGCATCAGGCCTTCCGTAGTGACTCCAACTCTTGCATTATGGATCCATTCCTATTCATTATGCATGTAAAAACATTGCTGGGCCACTGCAAATCCACCAGCGCCATTTTGCATAAAACTTTCTGCTTTGACTGAAAGACCGAAGACGATCAAGGAAGAGGATCTGCGGTTAACATCCAGTTGTTTCCTCGTATACATCCTCGAGTTTATCACACCTACACGTGTTCACCAACGCACGCTGAAACGCTCACAGGTGCGGCGCAGATGGCTCGCGAGGACCGCAATGGTGGAAGGAGATAATTGGAGAGAAGAGGACAGACGGAGGAATGCGAAACATCATTGAAGCAAATGCATGAAATAAACACACATGGGCTCATGCAGGGAACAGACTGAGAGGGTCTGACTTCCACCCACTCTCAAACTGGCATCCCAAAACTGTGACGTCACCTAGCGTCCCCCTCTGGGACGGAAAAATAGATATCAGACGTGTGAGAGACAGAAGGACGAGACTAGAGCAGGAAATCAGCAAAGAAACGAGATGGTCCTGTTGCTTTGTGCAGTTTTCTCTATTCCATGTCAAACGGTTGAATGTATTAGAAGTTGTCCACAATTCTCTTTCATCCCTTTCTTTTTTTCCCCCCTTCTTCTTTGAGCTTGTGTCCTCACGCCCGTTATCCAATTTGCAGATTCTTTCACACCCTTCCACAAAACACAGCTTTGCTGCACGGCTGTAGGAACAATAGAGGTTTGGCGTCCGAGTTCTGCGCTCTCTTTTCTTCTTCTCCTCACAGTCTTGTTCCTCCTCCGTGCTGCAGATAAAAAATGGGCTGTGCAGTGAGAATGAGATCTTGTGAGCGAGGAGTGCTCACCCTCCCATCTCTCTCTTGCATTCACAATCTCGGCTGATCTCTTTTACTGTCTCTCTCGCGCTCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88295 False 1588 lncRNA 0.46 2 13580834 13582731
TU88296 True 2231 lncRNA 0.45 3 13580834 13585383

Neighbor

gene id symbol gene type direction distance location
CI01000012_13538979_13549803 NA coding downstream 31031 13538679 ~ 13549803 (-)
CI01000012_13516097_13520943 HNRNPH3 coding downstream 59891 13515519 ~ 13520943 (-)
CI01000012_13512129_13512368 NA coding downstream 68466 13512080 ~ 13512368 (-)
CI01000012_13459355_13464706 TACR2 coding downstream 115011 13458661 ~ 13465823 (-)
CI01000012_13374979_13384349 NA coding downstream 196485 13374810 ~ 13384349 (-)
CI01000012_13590555_13590800 NA coding upstream 5139 13590522 ~ 13590800 (-)
CI01000012_13593620_13605408 NFKB2 coding upstream 8218 13593601 ~ 13605988 (-)
CI01000012_13608026_13615552 NA coding upstream 22636 13608019 ~ 13615566 (-)
CI01000012_13634251_13634759 NA coding upstream 48620 13634003 ~ 13634759 (-)
CI01000012_13640633_13647067 NA coding upstream 53744 13639127 ~ 13647092 (-)
G77409 NA non-coding downstream 27072 13553474 ~ 13553762 (-)
G77407 NA non-coding downstream 29249 13551252 ~ 13551585 (-)
G77315 NA non-coding downstream 94614 13485536 ~ 13486220 (-)
G77393 NA non-coding downstream 95515 13485063 ~ 13485319 (-)
G77289 NA non-coding downstream 127364 13452006 ~ 13453470 (-)
G77424 NA non-coding upstream 123 13585506 ~ 13587552 (-)
G77447 NA non-coding upstream 139514 13724897 ~ 13726271 (-)
G77449 NA non-coding upstream 155731 13741114 ~ 13741441 (-)
CI01000012_12954694_12954954 SF3B5, BRAFLDRAFT_284483 other downstream 625170 12954446 ~ 12957833 (-)
CI01000012_12079581_12084139 NA other downstream 1496574 12078936 ~ 12084260 (-)
CI01000012_12047175_12052116 NA other downstream 1528627 12046728 ~ 12052541 (-)
G75608 NA other downstream 2959963 10611915 ~ 10620871 (-)
G74982 NA other downstream 4004862 9575648 ~ 9576149 (-)
G77287 NA other upstream 33893 13619276 ~ 13633819 (-)

Expression


Co-expression Network