CI01000013_00055395_00073103


Basic Information

Item Value
gene id CI01000013_00055395_00073103
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 54114 ~ 73432 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_00055395_00073103.mRNA
CAATAAAAGGGAGGAAAGCTGGCTTTCACTGTCAGACTACTGAAGCACTTTCCTCCTCAGATGACAGTTCGACACAATTGTACTAGCAAAATATATCTGACCCCCATCTCTCCAGACAGACTCTCTTTCCCACACATACACACACATTTACCCACCCACGATTTTAGAACAAAAAAGGGACAACAGCGCCCTCTAGAGCAGAAACGGGTACAAAGCCATCAGTTAAGTGGCATTAATGGTGCATTAACGTCTCCTGCTGGAGGAAATGACACAACATTACTTCAGTTTCAGACTCAGTTCAGTCCCTTAAGATGAAAGAGGGCCGATATTCTCAAGGGGTTTTGCCAGGTTTGTAATGCGTTAATGTGTGTTAATATCAGGATTGTATAAGCAGCTTTAATCCCTATGCGGTGTGGAAGAGCACTTCTGTGGCAGCATACATTTCACACCCTCAGTGTTTCATTGTGACTGTAAATCCGGATCAGAGAGGATGTCTCACAGTAACTGGATTACAGAGATCTGGATTACATTTGTCCTCCACATGCTTAGCCTGGGTTTATTATTTGCTTAGTACAAACAGGGGTTCAAGAGGGAAATAGAAGCTACAAGAACCTGGGAGCCAGTGTAAGTCATATTAATTCATTTCAGATCCCTTGTAAACACCAGCTTAACTGTGGCAACAAAGCATATGGCTGATAAAAGATCACCAGTGTAAGATCAAATATTACAGAGGAACTTTTGTTTTACTCTTTGCAGCCATTCAAAATTTATCCATACTTTATTTGTAGATAGGCTTGAAAGTATGTGCCATAATCTAATGACAGACTATAACCAAAGACCCTTTAAGACAAATAAATAGGGAAACATCAAATTCTCCAAAGCTCTTCGCCTAACTTTCGATTAAATTTCATATTTGAAATCACCAATGAAATCTGACAACAACTATCCCATAAATTTTGTTTCTAAACGCTCGAATCATGACAAAAAAACAGCATTTTTTTAAGGCTGGATCAAGCTAATGCGCATGCGCACTCCTAAGTGCGCGTCTCTATAGTAAATGTGCGTCTAACTGTTTCTATAGGAACCGGAGCTTCTAACGGCCGCAGCAGTGATGCGATGACTTTACCAATCGGCAATTGGCTCTTATTTAGGAGGCGGGACTTATTCCGCCATATTGTGCGTTGCACTTTCTCCCATTCATAAAAATACGAGTGCACCGTCTTACAGTCCTGTGCGGATCCTTGACAGCTAGAGAGGCCGTGGTTTAAAAGAGGTTGTGTCATGTTGGAAGAACCATGCCGGAACAGGTCGACACGGCTTCTCAGCTGCTTACATTTGCAGCCTAACATCTCAACCCAGCAGTTTCACTTCAATTCACACTCTGCCACGGCTGTGACAGGCAGGATGTGGACCTGCAATTCACAACTTCAGTTAAGTGACCTAAAGCAGTTAATGAACATTAGATCAGGTTTACATGGAGAGACTGAAAATGAAAGGGAGGTGCTGGTACAAGAACAGAGGTACTGTCGAGCTCGGGCTCGCAAGCTTTCCCTGGAAACTAATCGCAGACGAAGGGCTCTAGAGGAGAGAAGGAAACAGTGGGATGTTCAGGAGCAGAGATTGAGGGAGAATATTCTACAGCAGCGCCATCAGAGGGTCCAGAATGCCACAGAGAACTTCCAAAGAGCTCACCTCTCTCCATCCCAAAGGAAAAGACCAGCAGCCTTTAAGAGAACACCACCCAACCTTGATGAAGCGCTTCATCATATTCAAGGCAGTCCACTCTTATATACTCATCAATCTCAATTTTTGTCCAGTGCCTCCACTACTAGCAGGAGCAGCACTTCTTCCCCAAAGCCTTCAGGGGGCGCCCGTCACCTACATGCCTTATCTGCAGCTGAGGCCTACACCAAACTCCTGCACGAGAACAGCCTGACTAACTTCAGGAACAACCAGCCGTTCTTCCTCAATGAGCAGCAGGAGACACAGACTGTTCTGAAAGAAAAAGAGCAGGCTGATCCACAGGAGTATCTTGATACCCCACATAGTGAGACAGAGAGTCTGTCTAGTCTGGACAGCTTAGAGAATGGAGAACCTCAGAAGAGCCTTGACACTGCGCCGGTTTGTTGCTCCCGGCAGAGCGCCACCTGTGCCCAGTCTTTCTACCTCGCTGTGGATCCTTCTAAGCTCCAAGACCTCAAAAGTCTTCAATCAACATTGAGACAGTCCAACAACCCATGTTCACCAACTCACCCCTCCTCTTCCATAGCCAAGAGTTTCCTGGAGGAGATCTTAAACCAGGAAATCAAACTCAGTCCCAGCTCACACTCACCAAGGGATCATGAGTCAGCAGAGGAAAGCAGGAGTCTCCGGAATATCACGCAAGAAAGATTTGATAACTCGAAGGACCAATCACAGAACTTTAACGCCCAGTCTACTCTTGGTTGCCAAAAAGAGATGACTCAGGAGGACTTAGCAGCTAATTTAGAGCGTATAATAACTCATGACAATGACAGGAACGCTCAAGGGAACATTTTGAAAGACAAAAGATCTGTGGTTGCCCACTGCAGAGCACAAGCTGTGCCAGATACCACACCCCAGAAATTCTCAAGTCTGACTAAAGACTTCAAGTCAGAATCCAAACAGCAGACAACAACCCTGGAGGAGAAATATACTAAACATGTTTCAGAAACACAGACAACTCTTCCAGCCAGCAGCAGTTCATTCAAAGCCTTTTCAAGCTCCGCTGCCCATCTTAGCATAACTTATCAGACTGACCCAAGTTCCCTAAACATGCAACCAGCAGAAACACTGAGTTCTTCACAGTTGCATAAACCCAATCCAGATGTAGATGATGCCACAGGGCTCAAGAGAGAATCCAAACCCCTGAGCATGGAGGAGAGTACAAGCATACATCCTTCAGATCCTAAAAATGAAACGGATGTCACCAAATTGGCAAAGGCTGGTATGTTGAAAAGCGTCTGCACATCTGCAGACCCCATGACCCACTCTGCCACTAACAACAATGTCAGATTCCTGAAAGGGATTCTTAAAAATCATTTAAAGTCCAAATCAGGAAATGTCAAATTCACTTACACCCCTGGCCATTTGCTTTTCACCAAAGAAGTGGCTATATTAATCCGGGACAGCGTGGAGCTGGCCAGGGCAAAACTCAATGAGCCAGAGCAGAATAGGACTATTAAGAAGAAACTACGTTGGTTTGATGAGGTGGATGGAGTTGAGGGGGTTGACCGAGCATGTAGAGACCCCGGCAGGCGTACTAGCCTTCCTCAACAAACCCATAAACAGCTCTTGGCGGATCACTCGGACCATGTGAATTTACTCACAGGGGTATCAAAAAACATTTCCAGTAAAACCTCTGCTGGGCCCCAATCCTCTAGACAGGCCTGGGCAGAGGTAGGGCCCCAAGAAATCCGTACACAGGAGCACACCTCTCAAAGACGAGCCCTCTGCATTGGGGGCTCGCGGATTCCCCGGAGAGCACGCTCAGCCAGAGCCGGCCCGTGTCCCGTTACCTCCCGGGCCAGGAAGGGCACTATCATCAGACCGCAATCTGCTAGGGAAGCGCAACATGTGGCCAAGACCCAGGGGAAGATTTTGGTGCCTCGGCCCCCTCCAAAACCTGAAGCTGTAGAGTGTGACTTAGCTGAGTACATCTCCAAAGCATCCTGCTGTGATGATGCTGTACAAATCAGAACAGGTCTGCAGGATTTGGCCCTATACAGAGATACTCCAGATAGCCAGACAATAGTTCATCGGCCTACCCTCAGAGCAGATACTATCTGTGCTCCAGCTCCACCTTACTCTACCTGCACCCACGAGACAGGCATCTGTTCCCTCTCCCCTCCAGATGCCCTTGCAGACAGTGCCAGACGCAGGTGTGGAGAAAATGGGATCTGTTTGGACCGGACTCCAACAGATGAGGAGATCTCACTGCTGTGGCATGGAGTCCGAAGTGCTCTCGCCAGCAAAGATGGTGACCCTCAAAGTTTTCTTGCTCACAATGGCCCGTTGTCTTCTTCTCCTCAAGTCAGTGCCAGCCTGTCCCATGTTACCATCAATGGTGATAGTCTGATCAGTGGTGTCAAAGGAGCCTCAAGAATGGGTGGCTTTTTCTTGTCTTCCTCTAATGGCAAAGAGGCTATAGTCAAAAGTCCAATAAGAAGACAGGCTATGGAGAGTAACATGGTGAAGAACCGATTTTCAGTAGAAATCGGCAGAAATCAAACTGCAGGAACCACACAGAGAAAGCCCAGTTTCCCTTATCAGGTCACTGTGCCAAAAACTCAACACCCAAATAAAAACGGTCATGCAGCAGACAGTGAAGTGTCTGCGTTATTTTTCTCCAGAAGTTATGACTGGTTACAAAAATCGAGCATTAACTCTTCCGTTACAGGCCCTGAGGTGTCAGACGGTGCTCATGAAGTTGTGGACTCTGCTCAGACCCATAAGTCCTGCAACGGTCCAGTTGGTCCCCAGAGCCAGAGAATACAGTCCCTCAACATCAGCGCTCTGTCACTAGAGGAGCAGAGGATCCTGCAGTCACTCGAGAGACTAAATCAACGTCTGCAATATGTGCAAGATACAGCTGGTGGCAACCCAGCAGTGAGGGGCATCTTTGCTTTAGGTCCTGCATTTAACCAGACCGGTGAGACTGTGGGCGTCACCATGCGTAGGCGAGGAGCCTCTGCTGACAATCGCACCCGAGCGCAACAGCGTTACTGACTACACCTCCCATGATCCACCACTCCCTCAACTGCACTTTGAAAACCTTTAAACCTTACAAATGCGTGCTTCACATTGCTGAGACACAATTAAATACTGTATTTGAGTGGTATTTAATTGTTTATCAGTTGTAATATGTGTGAAATGATTCTGGCAATACACATAATAATTAGTATTTGTGTAATAAAAAAATTAAAGAATTTATTTTATGCATTCATAATGCCTTCTAATTAGTTGATATTTATTTTTATAAATATATTTTCATAGGAATTGTATGTTATTAATGTACTGTATTTTTATTCTAAACAATCTTGACTCTTGGAGAAAAA

Function

NR:

description
novel protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_00055395_00073103.mRNA True 5075 mRNA 0.46 12 54114 73432

Neighbor

gene id symbol gene type direction distance location
CI01000013_00082083_00124049 YAP1 coding downstream 8651 82083 ~ 124049 (+)
CI01000013_00142867_00148461 SIX5 coding downstream 69435 142867 ~ 149008 (+)
CI01000013_00151644_00152374 SIX9 coding downstream 77703 151135 ~ 153096 (+)
CI01000013_00259782_00293697 MAP3K10 coding downstream 186350 259782 ~ 293697 (+)
CI01000013_00432775_00439564 RCN2 coding downstream 359343 432775 ~ 439579 (+)
G77541 NA non-coding downstream 16374 89806 ~ 114437 (+)
G77505 NA non-coding downstream 61270 134702 ~ 135653 (+)
G77562 NA non-coding downstream 88151 161583 ~ 161803 (+)
G77507 NA non-coding downstream 88863 162295 ~ 165109 (+)
G77534 NA non-coding downstream 219726 293158 ~ 300396 (+)
G77533 NA other downstream 635401 708833 ~ 709549 (+)
G77695 NA other downstream 873089 946521 ~ 952969 (+)
G79309 NA other downstream 2393333 2466765 ~ 2467171 (+)
G80062 NA other downstream 3510576 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 3991501 4050837 ~ 4065829 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_013549 cep126 coding NC_007129.7 CM002902.2 37380125 ~ 37407235 (-)