CI01000013_01762491_01764612


Basic Information

Item Value
gene id CI01000013_01762491_01764612
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 1761758 ~ 1764805 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_01762491_01764612.mRNA
ACATAAAAAGCCCAGACTTTGTATCTCTCATTCTGCTCTCTCTTTTCACTTAAAGACTAACCAGCAGACATTTGCATGCTGCCACATTACAGCATCCTATCTGTCTGTTCCCGCAGCAATCCGCATGTCTGTGAAATTGCTACGCGGCATATCTGTCGTATAAGCCTCGCGCGTGGATCACATCGCCATAGAAATAACAGCATTGTAAAAGTCATAAATCACATGATGGAAAAGCCAAAACTCAATTGAGTCGGAAACCATTGTGGCGTCTTCGGGGGCTAATTGGATTGGTGTTTAGCAAGACCCCGGGAGGAGGCTGGCCTAGCGTTCATGCATAAAATTGTCTTTGTTTCTCTCCGTCGGCCGCACTTTTACTTCTCCCTCATTGCATCTCAGCCTCCTCCGCCAATACCACACTGCACTGGGAGGCGTATTAGCACACCTTTGTGCCAACGCGGGAGGAGAGGGCGGGGGGATGGCAAAGAAAAAACAGAAATGATCTGGTATTAAATTTCAATAACACATTTCCCCCATCCCTCCAGAGTACAAGCAATCAAGGGTTAAATTGGATCTGTAACGTATGCTTGGTGACCCACAAATCGCTTCCCCATCAAACAGACTCATTACGAGCCGGCAAGCAGATGAGTGTTTGTGCGCCCCTGCCTCTGAGCGGCAGGGATTGTGTGTATTACTACTAACACGGCCGAGGTATTTAAATTTTGATTTTTTCGTAATGGGTTTTGACATGTTTCATTTCCTCCGGGGGAAGCGCCAGAGACCGCCGAAAGTAAATGTTGCTAAAAAGTCATCAAGGCAGAATATTAAAATGCCATCAAATAAGAATTTCGCTAATGTGATGGGGCCGGGGCCGCTGCAGATTTTAGCAGGAGACAAGCAGGGCACGTGTCTGCCCTCTGCGTCAGCCAGCCTGCTAATAGATGTGAGAAGGTCATCTGGCATTAGCGGCAGAAGTACGTTAGCATTTGCGCTGAGCGTCTCTCGCCAGACTCTGTGCATGTTTGAAGGCGCTTGGACAAGCAGGCCCTTTCACAGTGATGAATGGCTTTTTTCAAGCGTTCTGCTCCCTAGTTATGAGAAGGGTGACCTGGTCATTGGACGACTTTATGAAGCTATAAAAAATGTATGTCAGTCTCCAGTCTCTAATGCCATCCCCAAACAGAGGAGGAGGGAGCGGAGAGGGGGAGCCGGAATGCCCACTTGGGATCTGCAGTCTAATACACCACAGACTAAATCTGCTGATATTCTTGCAGTATTTGAAGCATGGGTGGAATACTTACCGGCTGTATAATGAACAGGTGAGAATGTCTTTATTTACAGGAATCGCTGGAGATGGCACATAGTGAATGCATTAACTGTTTTTACCTGCATAGCGATTTTATGATATACAAGGGTGTAACAATACACTCATGTCACGATTCAGTACTACACACGATACTGATCTCATAATACGATACTCTCACGATACTTTAAACAAAACCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_01762491_01764612.mRNA True 1502 mRNA 0.46 3 1761758 1764805

Neighbor

gene id symbol gene type direction distance location
CI01000013_01629280_01635701 NA coding upstream 125986 1629228 ~ 1635772 (+)
CI01000013_01443540_01469011 CHD2 coding upstream 292682 1443540 ~ 1469076 (+)
CI01000013_01405290_01429838 NA coding upstream 331445 1405290 ~ 1430313 (+)
CI01000013_01335438_01381270 SLCO3A1 coding upstream 380488 1335438 ~ 1381270 (+)
CI01000013_01275415_01295230 PLIN1 coding upstream 466434 1275122 ~ 1295324 (+)
CI01000013_01950237_01964249 NA coding downstream 185210 1950015 ~ 1964290 (+)
CI01000013_01989323_01993472 NR2F2.L, NR2F2 coding downstream 223726 1988531 ~ 1994075 (+)
CI01000013_02033469_02034368 NA coding downstream 268310 2033115 ~ 2034738 (+)
CI01000013_02081079_02127936 NA coding downstream 315861 2080666 ~ 2128269 (+)
CI01000013_02386700_02394730 NA coding downstream 621543 2386348 ~ 2395296 (+)
G78073 NA non-coding upstream 56098 1705393 ~ 1705660 (+)
G78032 NA non-coding upstream 110982 1650568 ~ 1650776 (+)
G78028 NA non-coding upstream 118639 1642569 ~ 1643119 (+)
G78020 NA non-coding upstream 129245 1632191 ~ 1632513 (+)
G78124 NA non-coding downstream 22738 1787543 ~ 1787793 (+)
G78231 NA non-coding downstream 164675 1929480 ~ 1929832 (+)
G78247 NA non-coding downstream 191908 1956713 ~ 1957220 (+)
G78254 NA non-coding downstream 200358 1965163 ~ 1965423 (+)
G78260 NA non-coding downstream 210255 1975060 ~ 1975381 (+)
G77695 NA other upstream 808789 946521 ~ 952969 (+)
G77533 NA other upstream 1052209 708833 ~ 709549 (+)
G79309 NA other downstream 701960 2466765 ~ 2467171 (+)
G80062 NA other downstream 1819203 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 2300128 4050837 ~ 4065829 (+)
G80845 NA other downstream 3070273 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 4291493 6049864 ~ 6060269 (+)

Expression


Co-expression Network