CI01000013_01950237_01964249


Basic Information

Item Value
gene id CI01000013_01950237_01964249
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 1950015 ~ 1964290 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_01950237_01964249.mRNA
ATTTAAAAAACACCAAATCAAGTCCTAAGGCAGTAGTTGATGAAAATCCCTAGATTTGTAAAGCCTGTGCACCCTCTAATACTTTTTGAAAGGTTTACGAGTTGGAATATTTGGAAAGAGCTCCTGCGATTGTCGTCTGTATACATAGCTCGCTTTTGTGCAGGACTTTTTTTTTGTTTCGCTCATTACAACCCAGCAGAACTTTGGCATGTATAATGACTTATGAGCACCCTGTTAAGTGAAGTATGTACTAAACAGCATGGGTTCTTGCCTGGTCACATCTTACATAATGAACAAATGAGCGAATCGTATCCACATCTGACGGTGCGCTGGACTCTGCACCGAGGTCTCCGTACCCCACCGCCAGAGGCCAGGGACTCCCCTGCCTGCCCTCGGAGTTCGCCCAGGGCAGCGTTACAGACGTCGGTGACCCCGCCACCCACCACTCCTCACCCGCCGTCCTGCCAGGGTCAGACGGTGCAGTGGCGGGATAAGAGGTCCCTTCTCCCGGAGGAGAGTGGGTCTGAACTGCCACAGCGCCGGTGTGAGACTGCAAGCCGCTGCCACTACAGCCCGCTAAGTGCTTTACAGTACAGCATGAAAACACAAAGCTGCAGGAGAGCATCACACGAGCTGCAGCAGGGCCGTCGAGCCTCCCAATGGAATGGTCCCAAAACCCCCCGTCTAAAAGCTTTAAACAACTGCTTACAATTCCACAGCATCTACACTGCTCCACTCTCAACAGGCAGTGACACCAGCAAATATAACTATGTCAGGACGCCTCACAGCTATATATTACCCAGCTCAGTGAGAGAGACAAAGGGCGAGTTATCATTTGGGCAGCAAAGAGGGAGGGAGACACATCTGGACATCTGCAAGCCAATGTCCAGAATGGCTGTCGGGGCTGTATTTAAGCTGTCACAGGCGTACATCGACAAAGTAATGTGTTGGGTTTCCATCAATTTCAAGGGGGTAAAATCTTACACCACTGAGGCTGCAGGCACAAAGCATTGCAGAGCTATCGCAGGATGGGAGCTTGAAGCTCTTAGGAACATTAGCCTGAAAGAAAACAAACGCGGGTCAACTGAATTAACCCAACTCCACACTGCCAACCAAGGAAAACTCCCAACAAAGAGCCTGTCATCTCTTACTGACAAGGACCAATCTGTACACACTGACCTGAAGTGTCCTGCAGACTACAGGAAACTCCCCTACATACAGAATACTGAGTTGGAGATATAAAGTAGCATAGCAGTAGTGCTAGTTATTCAAGACTTTTATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_01950237_01964249.mRNA True 1283 mRNA 0.49 7 1950015 1964290

Neighbor

gene id symbol gene type direction distance location
CI01000013_01762491_01764612 NA coding upstream 185210 1761758 ~ 1764805 (+)
CI01000013_01629280_01635701 NA coding upstream 314243 1629228 ~ 1635772 (+)
CI01000013_01443540_01469011 CHD2 coding upstream 480939 1443540 ~ 1469076 (+)
CI01000013_01405290_01429838 NA coding upstream 519702 1405290 ~ 1430313 (+)
CI01000013_01335438_01381270 SLCO3A1 coding upstream 568745 1335438 ~ 1381270 (+)
CI01000013_01989323_01993472 NR2F2.L, NR2F2 coding downstream 24241 1988531 ~ 1994075 (+)
CI01000013_02033469_02034368 NA coding downstream 68825 2033115 ~ 2034738 (+)
CI01000013_02081079_02127936 NA coding downstream 116376 2080666 ~ 2128269 (+)
CI01000013_02386700_02394730 NA coding downstream 422058 2386348 ~ 2395296 (+)
CI01000013_02409027_02409452 NA coding downstream 443016 2407306 ~ 2409607 (+)
G78231 NA non-coding upstream 20183 1929480 ~ 1929832 (+)
G78124 NA non-coding upstream 162222 1787543 ~ 1787793 (+)
G78073 NA non-coding upstream 244355 1705393 ~ 1705660 (+)
G78032 NA non-coding upstream 299239 1650568 ~ 1650776 (+)
G78028 NA non-coding upstream 306896 1642569 ~ 1643119 (+)
G78254 NA non-coding downstream 873 1965163 ~ 1965423 (+)
G78260 NA non-coding downstream 10770 1975060 ~ 1975381 (+)
G78263 NA non-coding downstream 14093 1978383 ~ 1978728 (+)
G78264 NA non-coding downstream 14985 1979275 ~ 1979529 (+)
G78265 NA non-coding downstream 15552 1979842 ~ 1980074 (+)
G77695 NA other upstream 997046 946521 ~ 952969 (+)
G77533 NA other upstream 1240466 708833 ~ 709549 (+)
G79309 NA other downstream 502475 2466765 ~ 2467171 (+)
G80062 NA other downstream 1619718 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 2100643 4050837 ~ 4065829 (+)
G80845 NA other downstream 2870788 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 4092008 6049864 ~ 6060269 (+)

Expression


Co-expression Network