CI01000013_02386700_02394730


Basic Information

Item Value
gene id CI01000013_02386700_02394730
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 2386348 ~ 2395296 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_02386700_02394730.mRNA
GCTTAAAGAGAAGCAAGCCTTAGCAGATAAGCCAATATGACACCAATAAGCAGGTCATAAAGTCATCTGTCTGGTTTCAGAATGCACACAGTGCATAATGGCTCTGCGGTCATCTCGTCCTGTTTTCTTTACTCATTTCCCTCCTTCCCACGTATATCTCTCAGTCTTCATCTCTCTCTGACACAACCTCGGACACAAGCACACACACCCTGCCTCTGCACAGCATCTCGGGAGACAGCAAGCAGGCCTCATTCTCCCTCTCATAACCCTGGCTGCTGCCAGCTCTCACTTCTAAGATGATTAAGAGTGCACCCAGTCTCAGGCTGACATTAGTTTAAATCCTCTGGGCCAGATGAGGCAATTCACACGTGAGAGAGAGCGTGGAATCCAAGTCAAGAAGGTTCAGAGCTCAGTTTGCCCCCGGGGAGCTCACGAGTCGCCCCCGCTCCGTCTTCTGTCCCTGTCTCCCCTTGCTAACCTGCCCACAAAGAGCCGGCTACCTCTCAGAGGAAGCATTCATCATCTCTGTCCAGCATGGACAGATGAACACGTAAATAGAAAATGCCTATGTAACCACATCTCACATCTGAGAGACGCTGAGGGAGGGCAGAAACTCTCTCCTCCAGAGAGGCAGAAAGACCACGAAGGAAACTCTGACAACAGGCAGGCAAAATCAGACATTTCCCTATACCGCATCACGCCAGGGTTGAGAGACCGACACTGTTCTTTCTCAGTCACCATGTCCCCCAGCAGGAAGGAAAAATGGTTGGCTCTTCCTTCGACGCTCGCCCTCACGACATACATAGACAAGCTACGGTCCTGCAGCGCAGACAGGCTGGGTGAAGCTCTGAATGACTTGTATCGCGCAAGCCGGAACGGGACTCTATTACAGCATGAGTGTTGTTTTGTTGATCCAGCCCAGGGTAAAGAGTCCGGTCCCGGCAGCTTCGTCGTTGTTAATGTCTTCCGATGCTAATCTGACACTGCCATTTTCCTCTCTTCCACCTCACACTTTTTTTCCTGCTGTCTTACTTCCTTTCTGCTTTTTGCTTCCTTTCTCTTTGGCTCTCATCCTCTCATTCTTTCCCTTGTTAAAGTCTCTCAGTTTCCTCTCTCCACATTCCCTCACCTCTGTTTCCAAGGCAACTAATGAGATATAATTAATAAGATCCAGCAAAGGGGTGTGCGTGAAGAAATGAGTGAAAATGAGGCTCGGAGAAGGATCGTGTTTGTGCGCAGATGGAATAATGCTGCACGCGCTCACTCATAACAAACTTTTCACACCATGTTAACTTCCTTTTTTAAAACATGGCTTAAGGTGATGTTACGCGGCAGGACAAATGAGTTCGAAATACATTCTTCACAAGTTGAGATCAGGATATGAGCGCTGTTTCAGGAAAATGGTACATATGTACATGTCAACAAAAAAAGAGCCCTGGAGGAGAGACTGAAATATGGGCAATCTCACGCAGGCATGAACTAGAGATTTTCTACATTTATATGTCAGCACTTCATTATGCAAAATATATTAAAAGAACCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_02386700_02394730.mRNA True 1542 mRNA 0.47 4 2386348 2395296

Neighbor

gene id symbol gene type direction distance location
CI01000013_02081079_02127936 NA coding upstream 258079 2080666 ~ 2128269 (+)
CI01000013_02033469_02034368 NA coding upstream 351610 2033115 ~ 2034738 (+)
CI01000013_01989323_01993472 NR2F2.L, NR2F2 coding upstream 392273 1988531 ~ 1994075 (+)
CI01000013_01950237_01964249 NA coding upstream 422058 1950015 ~ 1964290 (+)
CI01000013_01762491_01764612 NA coding upstream 621543 1761758 ~ 1764805 (+)
CI01000013_02409027_02409452 NA coding downstream 12010 2407306 ~ 2409607 (+)
CI01000013_02411870_02429950 NA coding downstream 15131 2410427 ~ 2429957 (+)
CI01000013_02510121_02510417 NA coding downstream 114787 2510083 ~ 2513164 (+)
CI01000013_02528016_02529126 NA coding downstream 132152 2527448 ~ 2529246 (+)
CI01000013_02656037_02664145 HSF4 coding downstream 260741 2656037 ~ 2664398 (+)
G79185 NA non-coding upstream 1160 2371730 ~ 2385188 (+)
G79241 NA non-coding upstream 69405 2316730 ~ 2316943 (+)
G79232 NA non-coding upstream 82653 2303317 ~ 2303695 (+)
G79075 NA non-coding upstream 255597 2130518 ~ 2130751 (+)
G78265 NA non-coding upstream 406274 1979842 ~ 1980074 (+)
G79194 NA non-coding downstream 24225 2419521 ~ 2420107 (+)
G79290 NA non-coding downstream 41146 2436442 ~ 2436843 (+)
G79291 NA non-coding downstream 42352 2437648 ~ 2437854 (+)
G79303 NA non-coding downstream 62092 2457388 ~ 2457601 (+)
G79310 NA non-coding downstream 73587 2468883 ~ 2469113 (+)
G77695 NA other upstream 1433379 946521 ~ 952969 (+)
G77533 NA other upstream 1676799 708833 ~ 709549 (+)
G79309 NA other downstream 71469 2466765 ~ 2467171 (+)
G80062 NA other downstream 1188712 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 1669637 4050837 ~ 4065829 (+)
G80845 NA other downstream 2439782 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 3661002 6049864 ~ 6060269 (+)

Expression


Co-expression Network