CI01000013_02692887_02696848


Basic Information

Item Value
gene id CI01000013_02692887_02696848
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 2692443 ~ 2697020 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_02692887_02696848.mRNA
TTATAAAATTGTGTGTAATGTTGTGTCATTTCAATTTCTTTATTATCCGGGTAAGCACTGTACTAATCTTTATTCCTCTTGGATTAGACATAACGTCCCCTTGGAATTGTAAGGTTCTATCTGACATTTTTGTCAAAATTGAGTTATTCACATATTCATATTCTGTGACAACTTATTTACATTTATGTGATGTTTCTTTTTTCAAAAACATTTTGGTACTTTTTTTTAGAAAACAAAAAGGTTCTATCTACAAAGTCGAACTCTAACTTGGTTCTATAAGGTTCTATCTGCGTGAGCCAATCAGCACTTCGAATGCACACACGAGGACCAATCAGGATCAACGTTGCATCTGAGTTCCTAGAAGAAATCAGTGAAAGGAAGTTGATTGTGCCCTCAGTAACCTGGTGGAACTCATTTTATTACAACTATGTTTGGATCATAGAAATGCCCCTAACTGACATTAACAATCTATGCACACAGCTTCAGATTAAATGTATGAATGACAAGGAATACCAGTTTCTGAAGGAATACTGCTCCATTATGAAGCCTTTCAGCGTTGCACTGGACATCCTACAGGGTGAGGAAACTTGTTTTTATGGGACACTTCAACCAACACTTGAAGTTCTAATGGCCAAAACTTTAGCAATGCAAAATGGCCTTTCACAAATGACCACTGGGTTGCCTGAAATAATTGTGGGAGCAATTAAAACTCGCTTTGCCACAACAATTGACTCCAAGGATGCCCTACTGGCTGCCGTCTCGCTGCCCAAGTTTAAACTGCGCTGGGTAAAAGAGGAAACCAGAAGAGATCACATCAAGTACCTTCTCACCTCTGAGTGCCGCGCCCTAACAGTAGAAGAGCCTGCCACCCCAATGAGTGATGCTCCTCAACCTGCTGCAGTCACCTCCCATGAGGATGACTTCTTTTCATTTGATGAAAAGCCCAATGCCATGGCTGATGCACCTATGTCAGTGGAAACAGAGATCGCTCCTGCTGTAGTTCTGGGTTTGTGCTGTTTGGTGGGTTTGCCAAGCAATATCACAGTAATCATCAGCATTGCTCGTGAGTGGAACAAACATTTGAGCTTTACCTTAAAACTAATACTAAACCTTGCTGTCTCTGATGCTTTGACCCTTTGCTTGGCTCCTGTGGTGCTGTGTGGAATACTGTTTGGATGGAAACTCGGCCTTTTGTTTTGTAGGATCTTATTCTTCTTGGGTCACTGGAGTCTGTATGTTGGTGTCCTGACGGTCACCTCCATGAGTGTGCACCGTTATCACAATGTCATCAAGTCCAGAGTCACTAACAGGATGATACTGCACAGACTGAAGAGACGGCACAGGCACCTTCAGCTGATTAGCATCTGGATTCTAGCCTTTGTTTTTGCCCTACCAATATTTTTCACTCGAGAACTCAAAGACAAGGATGGACTGCAAAGATGTCAGAAGACAATGGAGTCACAGTCTGTAGTAGTGACTGTTTTGCTTCTTCAAATCCTGTTGGGGTTCGTCATCCCATTTTTGATCATGTTAACATGTTATCTCTGGTTGCATAAATTTTTGAGCCAAAAAGCCAAGAGCTCCAATCTAACTAGAGCTCCACAGAACCAGGAACCCAGAAATCAGGGGCCAAAGTTTAGGACTTACAAGAAGAGACTTGTGGTCAGCATCGTTGTGGCTTTCTTTCTGTTTTGGACTCCTGTGCACATTATTAATGTGATTGATATAGTTACTATTCTGACTAAAACTTCTCATCCAGACGTTCATTCCCAACTGAAGTCCTTCCGTAGAGTTTATGGTGACACAAGCAAGACTCTGGCTTTGCTAAACTGCTGTCTGAATCCTTTTCTCTATGTTTTCTTTTCAAGGAATGTCATAAAGTGTAGTAAGTAGAACCCCCCATTGTTTATTTCACAGTTACAAATTCAACTAATTATTTTTGAGTTGTAAACTTTGTCTGCTAACAAAATTGAGATCGGTTTGCTTTAAAAATTTCTTCTCTGTTGTAAAAAGCAGCATGTATGCAATCTTTTATCTTTGCTATGCCAAAAGAACATCTATGTAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_02692887_02696848.mRNA True 2065 mRNA 0.41 2 2692443 2697020

Neighbor

gene id symbol gene type direction distance location
CI01000013_02685665_02686639 NA coding upstream 5608 2682467 ~ 2686835 (+)
CI01000013_02666598_02669821 NUDT21, CPSF5, NUDT21.L coding upstream 22622 2666598 ~ 2669821 (+)
CI01000013_02656037_02664145 HSF4 coding upstream 28045 2656037 ~ 2664398 (+)
CI01000013_02528016_02529126 NA coding upstream 163197 2527448 ~ 2529246 (+)
CI01000013_02510121_02510417 NA coding upstream 181909 2510083 ~ 2513164 (+)
CI01000013_02709871_02711692 NA coding downstream 12433 2709453 ~ 2712499 (+)
CI01000013_02815238_02816664 NA coding downstream 118160 2815180 ~ 2817323 (+)
CI01000013_02859975_02863496 TMEM170A coding downstream 162955 2859975 ~ 2863946 (+)
CI01000013_03019688_03044233 TSNAXIP1, PARD6A coding downstream 322668 3019688 ~ 3044374 (+)
CI01000013_03087239_03094115 TSNAXIP1 coding downstream 390219 3087239 ~ 3094458 (+)
G79358 NA non-coding upstream 94072 2595938 ~ 2598371 (+)
G79344 NA non-coding upstream 118920 2572701 ~ 2573523 (+)
G79332 NA non-coding upstream 165513 2526106 ~ 2526930 (+)
G79310 NA non-coding upstream 223330 2468883 ~ 2469113 (+)
G79397 NA non-coding downstream 37084 2734104 ~ 2748629 (+)
G79440 NA non-coding downstream 70433 2767453 ~ 2767739 (+)
G79441 NA non-coding downstream 71457 2768477 ~ 2769076 (+)
G79442 NA non-coding downstream 72457 2769477 ~ 2769829 (+)
G79443 NA non-coding downstream 73002 2770022 ~ 2770347 (+)
G79309 NA other upstream 225272 2466765 ~ 2467171 (+)
G77695 NA other upstream 1739474 946521 ~ 952969 (+)
G77533 NA other upstream 1982894 708833 ~ 709549 (+)
G80062 NA other downstream 886988 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 1367913 4050837 ~ 4065829 (+)
G80845 NA other downstream 2138058 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 3359278 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 3381542 6075400 ~ 6081684 (+)

Expression


Co-expression Network