G256835


Basic Information

Item Value
gene id G256835
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019171597.1
NCBI id APWO02001195.1
chromosome length 221831
location 135031 ~ 137329 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU351527
aataatatctgaaattaaaagaaaataaagctgAGATAAAGACGTGGATGAAGGTGATGAATCTTCAGGAGGTTTTGTTTGTAAAACCCTTTTATATATTAAAGAGTTAAATGAAATTATTTCTCGTTCACACAGAGTCTGATTTGTACAGATGAAGAAATAAAATCAGGTGTTTAATATCAGTTTATTCAGTCTAATCTCTGCTCTGTTTTCTGTATTAAATTAAACCCACCAATCAGAGCTGCTTCATCACTGCTGCAGATCAAACTAACCCAGCATGTGGGCggagtcagaaatcaataaccCGTTAATACAGGAATTACTGATTTactggagtttcagtttcaatcaGAATTAACCTGTAATTAACCCTGTTCACCTGAtcatagcgccaccatgtggagtgaTGAAGCATAGCTTGAGTAAGTGTAATTGGGGGCGGGGCTTTTATTTCAATACAAATATTCATATTTGGCATATCAATAATCAACTATCGATcacaaactaaaactatataatataatcgtGATAtggatattttgtcccaccccttatCGTGCTCTACAGAGTGCGCTGGACTCACTATTGATCACTATTGATCACTGTGTTCACTAAAGAAGGAAAAGCCCTTTAATAGCCTGAATAAATCAATGTGTTGATaaattgtttattaatgtttttattcatgtGCAGAGCTGTGGAGTTTCAGCCTCGTTTAACAACGTTAAAAATCACATCAATATTTTTCCATCTGAATAAACGATTCTCTGTGTGAACAGAACCTGAATCAACTCCAGAACCGAACCCTTACAGAACATTTCACTCTTCACCACTTTAATCCAAATAATACTGGATCATttctatcatcatcatcagaacCTGGGTTCTGGTTCCTCCAGCAGTGATTGGTTGAATAATTATGGAAATGCTGAATCTGGATGGAGGGAATAAAGTTACGTGAGAAACGCCTTCCTACTAAATTTATTACGTTAATCACTTTAATCCACTTCCTGTAGCGCCTGGAGAACACCGATCAATAATCAATAAGTGTTTCTACACAGACTTCTTTATTACACCAGTTAAAGCTCCAATCAGTCAACACTGGCCAAAAGTAACGGGACACCTGATcactcattgtttcttctgaaatgatGGGAATTTAAAGAGTTCTtcctgattttgttggagtaactgtttctactgtctaCATAAAACATTATACCAGATTCTAGAGTAAAAcgttgctgtgaggatctgatggACTACATTCAGTAAAGAGCTCAGTGTCCACCAGCACTTAAACCTCAACACTTCCTGTTCATTTTAATAGAGAGAGCTGCTGGatgaatccgcCCTCTGCACTGCGTCCGGCCAATCAGGAAAGAGCAGGCTGTGACTTCgtacacacagagagaacagCCACCTTTTAAACACAGAGGAGAATCTAAAACAGCTGAATATGGatttataaatataactatagacaaatgttaTGGACACGCCCACACGGACGGGGACACACCCACACACGCCATGGCGGAACGTGTTGAAGTGGCGGTAGTCTCGCACcatcagtgaggtcaggatggATGATCATCATCACCTGCCCTCATCTTCATCCTCAACTCATTTCATCTCAGTATCCTAAACTTAATCATACGGAGCTCCATCATTCAGAAAACACAGATCCACTGATCAATACTGGGGTTCAAACCCCTCTGTAACCTGATATAAAACACAGACTCATTATTTATAGATCTGCTGCAGTCCTGATCTGTTGTATCTCAGGTATCTGGTCAGTGTGAAGCTGATTGGAGTTTTAACCTGTATCTAATCGCAGCTGTAGATCTGAAGAACAGCGAGGGGAGAGAGGTGTTCCTAATGTTCTGGCAGGTGGTGGGTTACGGTGTAGAGTGTTTAtgacagaaataaaagtaaaataaaagtaaaatacaggAGTAAATCCCTTTATAGCGCTGCTGGGGTTAGAGCGTGGGCTCGCCGGCTGCTGATTGGTAGTCGGGGGTCAGGAGGGAGATGGTCGGGTCCTCTGCAGGTTCCGGGTCAAAATAAGAGTCcccctccagctccagcaggaTGGGCAGGTCCTCCCCGGGGTCggtgggggcggggtcaggCAGGACCACCGGCTGAGACGTGTACTGAACCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU351527 True 2170 lncRNA 0.41 3 135031 137329

Neighbor

gene id symbol gene type direction distance location
LOC107197265 NA coding upstream 4057 112409 ~ 130974 (+)
LOC111188544 LOC108257444 coding upstream 20475 107673 ~ 114556 (+)
LOC103046842 NA coding upstream 34202 93069 ~ 100829 (+)
LOC107197357 NA coding upstream 66675 62310 ~ 68356 (+)
LOC103046535 bop1,LOC107559671,LOC107669991,LOC107716577,LOC107693294 coding downstream 22614 159943 ~ 216441 (+)
G256822 csk21,zgc:86598,LOC108425256,LOC108267736,LOC103028340,LOC105902032,LOC105022821,LOC107670008 non-coding upstream 79307 45376 ~ 55724 (+)
G256819 NA non-coding upstream 90151 44439 ~ 44880 (+)
G256816 NA non-coding upstream 114056 20630 ~ 20975 (+)
G256864 NA other downstream 32372 169701 ~ 170409 (+)
G256865 NA other downstream 41417 178746 ~ 181336 (+)

Expression


Co-expression Network