CI01000013_03241607_03258684 (MBTPS1)


Basic Information

Item Value
gene id CI01000013_03241607_03258684
gene name MBTPS1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3241607 ~ 3259203 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_03241607_03258684.mRNA
ATGTTTGCAGTAAATTAGGAGTATCTGTATGTAAGCTAGGTTTTAATAATTTGATGGGTAATAACCGGAAACGGACCACAGGTACCATGATCGTACGGCTGTGTTTGTTTGTGGCCGCCTTAGGGGGTCGATTGCCTTTGGTGGGCACAGAAGAAAACGGTGGACCATTCTCAACTCCCTTTCATCCTCATCTGAATGCTGATGCACTCTTGAGCCCAAACTGCTCACAGGTCATGCTGAAAGTCGACTTTTCTACCAAAGTGGTCAAGCATGAGTACATTGTTGCATTTAATGGATACTTCACAGCCAAAGCGCGCAGTGATTTCATCAGCAGCGCCTTGCGAGATGTGGATGCGGTGAACTGGCGCATCGTACGGAGGGACAATCCTGCTAGCGATTACCCCAGTGACTTTGAGGTGGTGGAGATCCGGCAGGACGTCCGCAGCAGCCTGCTCACCCTGCAGGACCACCCCTACATCAAACGAGTGACGCCCCAGCGCATGGTCCTCCGCAGCCTTAAAATGACTGACTCGGGCACTGATGGGGCGTCCCCGTGCAATGACACACGCTGGGTGCAGAAGTGGCAGTCTTGGCAGTCATCAAGGCCGCTTAGGAGGACCAGTCTGTCTCTAGGCTCTGGATTCTGGCATGCCACAGGAAGACACTCCAGTCGTCGTCTTCTGCGGGCCATTCCCAGACATGTCGCTCAGATACTGCAAGCAGATGTGCTCTGGCAGATGGGACACACTGGCTCTGGAGTTAAGGTAGCAGTATTTGACACTGGGTTGAGTGAGAAGCACCCTCACTTTAAGAATGTTAAGGAAAGAACCAACTGGACCAATGAGAAAACACTGGATGATGGGTTGGGACATGGTACCTTTGTGGCTGGGGTTATTGCCAGCATGAGAGAGTGCCAGGGCTTCGCTCCTGATTCTGAGCTTCATATCTTCAGAGTTTTTACTAATAACCAGGTGTCCTACACCTCCTGGTTTTTAGATGCCTTTAACTATGCCATACTGAAGAAGATAGATGTCTTAAATCTCAGTATAGGGGGACCAGACTTTATGGACCATCCATTTGTTGACAAGGTTTGGGAGCTCACAGCCAACAAGGTGATTATGGTATCTGCTATTGGCAATGATGGCCCTCTCTACGGAACTCTGAACAATCCAGCAGATCAGATGGATGTTATTGGTGTTGGAGGGATTGATTTTGAGGACAACATTGCCAGGTTCTCATCCCGAGGCATGACAACATGGGAGCTGCCAGGTGGCTATGGCAGGGTGAAGCCTGACATCGTGACGTATGGCTCTGGTGTGCGTGGTTCAGGATTGAAGGAGGGCTGTCGTTCTCTTTCTGGCACTAGTGTTGCATCACCTGTAGTGGCTGGAGCTGTCACACTGCTGGCCAGTACTGTGCTGAACAGAGAGTTGGTGAACCCAGCCAGTATGAAGCAGGCCCTGATCGCCTCAGCACGCAGGCTGCCAGGTGTCAACATGTTCGAGCAGGGCCATGGCAAACTTGATTTACTCAGAGCCTACCAGATCCTTAACAGCTACAAGCCACAAGCCAGGCATCCGGCGTCTCCGTCGCACCCTCGTTCGGATTTAATTACATTCCAGCCTGGTTACAGAGTAGATTTGACCAGGTTCATTATCTTTCACTGGCTCTCAGTGAGGTCATTGTCCTCTAACGAATTTCTAATGGTGTTTTTATTCTTTAGCCTGAGCCCGAGCTACATAGATCTGACCGAGTGCCCTTACATGTGGCCCTACTGCTCACAGCCTATTTACTACGGTAGCATGCCGACAATTGTCAACGTGACCATTCTTAATGGTATGGGCGTGACTGGAAGGATTGTGGACAAGCCCATCTGGCAGCCCTACCTTCCTCAGAATGGGGATTATGTGGACGTGGCGGTATCTTACTCGCCTGTGCTCTGGCCTTGGGCCGGTTACCTGGCTGTTTCTATATCTGTGGCCAAGAAAGCTGCATCGTGGGAAGGCATCGCTCAGGGTCATGTCATGGTTACAGTGGCCTCGCCAGCAGAGAATGACTCAGCAATAGGTGGTGAGATGACCTCCACAGTGAAGCTACCAGTGAAGGTAAAGATTGTCCCCACTCCTCCACGTAGTAAGAGGATTCTGTGGGATCAGTACCACAACTTGCGCTACCCGCCTGGCTACTTCCCCCGAGACAACCTGCGCATGAAGAACGATCCGCTTGACTGGAATGGTGATCATATCCACACTAACTTTAGAGACATGTATCAGCACCTTCGCAGCAATGGCTACTTTGTTGAGGTCTTGGGTGCACCAATCACATGCTTTGATGCCAGTCAGTATGGGACCTTGCTGATGGTGGACAGCGAGGAAGAGTATTTTCCAGAGGAGATCTCTAAGTTGAGGAGAGACATAGATAATGGCCTGTCTCTCATTGTCTTCAGTGACTGGTACAACACATCAGTCATGAGAAAAGTCAAGTTCTATGATGAGAACACCAGGCAGTGGTGGATGCCAGACACAGGGGGCGCTAACGTGCCAGCCTTGAATGACCTGATCTCAGTGTGGGGTATGGCCTTCAGTGACGGTCTGTATGAGGGAGACTTCACAATGGCAGATCATGACATGTATTATGCCTCTGGGTGCAGCATTGCTCGTTTTCCTGAGGATGGGATTGTCATTGCTCAGACCTTAAAGGATCAAGGTCTGGAAGTCTTAAAACAAGAGACGGCAGTGGTGGAAAATGTGCCTGTGCTTGGACTGTACCAAACACCCTCTGAGGGGGGAGGTCGCATAGCGCTCTACGGAGACTCCAACTGCATTGATGACAGTCACAGACAGAAAGACTGTTTTTGGCTGCTGGATGCTCTGCTGCAGTACACTTCATATTCCATGACTCCGCCCAGCCTCACACACTCTAAAAACAGAGTGGTTCCCCCTACAGGCACAGACAGGCCATTACCACAGAGATTGGAAGGTAATCACCTCTACCGTTACTCCAAAGTACTGGAGGCTCATCTAGGTGACCCCAAGCCTCGTCCTCTACCTGCATGCCCTCATCTGTCTTGGGCTAAACCCCAGCCACTTAATGAGACTGCTCCTAGGTCAGTACACAAGACCAGTGCAAAAAGATCTAAATTTGGACCACATCTGACTAGGTTTGTTGACTCGTTTTTTGTTTTGTTTTTTGTTTTTCTCAGCAATCTGTGGAAGCACCAGAAACTACTATCAGTGGACATGGACAAGGTTGTTTTGCCTAATGTAAGGCCATATCGGCCTCAGGTTCGACCCCTGTCTCCTGGAGAAAGTGGAGCCTGGGACATCCCTGGAGGAATAATGCCTGGCCGCTATAATCAAGAGGTGGGCCAGACCATCCCGATGTTTGCGTTTCTTGGTGCCATGGTTGTGCTTTCCTTCTTTGTGGTGCAGTTGACCAAGGCCAAGAGCAAACCCAAGCGCAGGAAGCCCAGAGTGAAACGGCCGCTTTACCTTCAACAACAGCAACAACAAACCCCTCACTCAGGCAAAAACCCCACCGTATGAACGGCCACATCTGGACAAACTGATGGGGAACAGTCTTCCCTGCGGTGTGTGTGTGTGATGCCGTAACCCCGTTATAATGACATTGTTAGACTCTGAAGGGCTGTGTCTGTACATTCTTGAGATGAACCAGCCACCTGCGCCCAGATGAGGGCCTTGCTTGGACATCAGTGTTCCCTCTCCTGTCTTTATTCAACACATGCCTTTCAATTCAGTGACCAAATGGAGGAATGTTTCCCTTTTTAATTTATTGATGATGATTAATTGACTATTGACCCTTGCTTTGTATGTCAAATTGGACAACCAAAACCAGCCATTCAGTTTTTTTGATCAACATATAGGACTCTTTTCCACATGTGCTCATTTTTGTATTCTGTCCGACTGTGTTTTTTATAAAACGGTTGTGTGCTTACATCTTTTGTAAATAGCCATCATGATTTCACTGTTGTTGGTGTGGAATTATCAATGTTTTAAATATATCTTATCCGATATAAAGCAAGCAAACCTGCCTCTGTCTTTGTA

Function

symbol description
mbtps1 Predicted to enable serine-type endopeptidase activity. Acts upstream of or within cartilage development; lipid metabolic process; and liver development. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Is expressed in several structures, including axial chorda mesoderm; axis; margin; pleuroperitoneal region; and tail bud. Human ortholog(s) of this gene implicated in spondyloepiphyseal dysplasia Kondo-Fu type. Orthologous to human MBTPS1 (membrane bound transcription factor peptidase, site 1).

GO:

id name namespace
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K08653 MBTPS1; membrane-bound transcription factor site-1 protease

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_03241607_03258684.mRNA True 4064 mRNA 0.49 22 3241607 3259203

Neighbor

gene id symbol gene type direction distance location
CI01000013_03225714_03236717 FAN1 coding upstream 4562 3225714 ~ 3237045 (+)
CI01000013_03186643_03190449 NRN1LA coding upstream 50930 3186643 ~ 3190677 (+)
CI01000013_03121085_03147061 EDC4 coding upstream 93985 3121085 ~ 3147622 (+)
CI01000013_03087239_03094115 TSNAXIP1 coding upstream 147149 3087239 ~ 3094458 (+)
CI01000013_03019688_03044233 TSNAXIP1, PARD6A coding upstream 197233 3019688 ~ 3044374 (+)
CI01000013_03262979_03269729 SLC38A8A coding downstream 3776 3262979 ~ 3269882 (+)
CI01000013_03457529_03463949 PNP6 coding downstream 198326 3457529 ~ 3465011 (+)
CI01000013_03477151_03488842 CALB2, CALB2A coding downstream 217837 3477040 ~ 3489333 (+)
CI01000013_03493064_03499971 GOT2, GOT2A, GOT2B coding downstream 233861 3493064 ~ 3500131 (+)
CI01000013_03501267_03503856 NA coding downstream 242064 3501267 ~ 3504388 (+)
G79639 NA non-coding upstream 39294 3201911 ~ 3202313 (+)
G79503 NA non-coding upstream 46799 3192354 ~ 3194808 (+)
G79625 NA non-coding upstream 128540 3112613 ~ 3113067 (+)
G79601 NA non-coding upstream 194075 3047236 ~ 3047532 (+)
G79600 NA non-coding upstream 227854 3013211 ~ 3013753 (+)
G79909 NA non-coding downstream 106339 3365542 ~ 3365893 (+)
G79976 NA non-coding downstream 114725 3373928 ~ 3374243 (+)
G79994 NA non-coding downstream 130742 3389945 ~ 3390326 (+)
G80003 NA non-coding downstream 152292 3411495 ~ 3412005 (+)
G80058 NA non-coding downstream 271232 3530435 ~ 3530847 (+)
G79309 NA other upstream 774436 2466765 ~ 2467171 (+)
G77695 NA other upstream 2288638 946521 ~ 952969 (+)
G77533 NA other upstream 2532058 708833 ~ 709549 (+)
G80062 NA other downstream 324805 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 805730 4050837 ~ 4065829 (+)
G80845 NA other downstream 1575875 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 2797095 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 2819359 6075400 ~ 6081684 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_013409 mbtps1 coding NC_007129.7 CM002902.2 21645309 ~ 21685055 (-)
bowfin (Amia calva) AMCG00020381 mbtps1,LOC107596929 coding CM030127.1 CM030127.1 17559537 ~ 17584315 (+)