XLOC_007695 (si:ch73-43g23.1)


Basic Information

Item Value
gene id XLOC_007695
gene name si:ch73-43g23.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 7120620 ~ 7128980 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00015090
TGATAGAAGAGGTCTAAAATTAGGAAGCCCCTATGACTGTTTTGGCCTAGTGTGTCAAATTCCATTCGCAGGCTCCGTCTATGCTATCGCAGCACCTGCTCTTAGCTGTAACCCCCTATTAAGCTTGGCAGAGGCATGCACCTATGTTAAAGCATGATTAAAAAAGCCGCAGGTCAGTTTCATCATGTCCTTTTTTCTgtgcatgctttttaaaaagtggTATCAATCGATGATTGAAATAGCCAGGCTCTGCTAGCTCAGACGTGGCTAATGGCACAGCATTTTTTGGGGCTTAGCTTAAGGGGCTGGACATTTCTGTGCACCGAGTGGCCTGTTTCGATGAAGGGTCAGTTTGGCACTTGGAAACCTGGACCCCCCAGCAGGAGCCTCATTCACAGCTCATGGTTCAGTGCGTAACTGTCCCCTGTGAATGTTCTCTGGAGAGGCTGCTCCATTGAAatgaccacatgggaaaacagCGGAAAAAGATGTGAACAGATTCAAAAACTGCTGAATGGCAAGCTCAGACATTTATAAACTGCTCAAGAGACCACCCAATGTCTGGGATATCTGAAGTGAAGAAATGGAACGCTGGGTTTTAGAAGGAGACAGCTACTCTTTCCTTCGCAGTGCTCCACACACATTTAACCTGCAGAATCGCGAAGGGCCGAATCGCGTTGAGATATTTGACATCACTTCAATCCCCAGCCATCGCAATGCCATATCCGAAACAACCTGTCTGTGTGACATTTTTGGAGATGACGGCGAGTCCCAGTCACTTTCCAGTAGCCCAGCCTCTGCTACATATGCCAGGAAGGAAATTGAACAGCCTTTCCCAGCAGATGATGCCAATGACTCCTCAGGATCTTATCACACTGCCAATGGATCTGACTTAAGTGACAACGCTGAAGTCACCTACAGCACACCCTCTCCAAAGAATACACAAGATTTTTGTACATCAGAGAACAGTATAACTGATTCACCGCCACCTGAATCAACCGTCTTGTCTGATTTCCAAAATGGAATTAATGCATTTGACTGCACACCACCTGCACCCGAAGTGAATGGTAATGACCTTTCACATAAAGATTACTGGGAAGAACCCCAAGTGTCAGTGAACGCTGCCCCGGTGATTGAAACAGATGAACCTGTACCACAGGATATTAATTCAACACCAGATACTTGTCTTATTAATTCATCAAAGGAAACTACTAATCCTACATCTTGCTCTTCAGAGCAGAACGAAGCCATTGTTATGGAGCAAGAAGTGAACATAACAACACCTCAACATACAAGTGCAAGCCCATTTGAAGACGAGCAAGGTTGCATAAGTATATCTAAGTGTACAAGCTGTGAAGACTTGGCAGAATCTAAAATTGAACAAGATATTGAGATGTCTTCTGTGAGCAAAGAAGGTATAGCCTCCAGTAATCCGCAAGAAGAAAGAGTTCTTCTTCCACAAAAGATTGTAAACAGTGGCTCTGCATCAGACCTGTCAAACGCTTCTCCAACAGACTCCATGTCTATTCAGGAAATATCTATTTCACCTGCAGACCAAGATATTTGCTACACACCAGAGCACAGATTAAGCTCTGTCTCCCCTGACAGCAGAACAATTTTCTCCACACCTGCATCCATAGGTAGATCTTCACCTGAGCTGTTCGATTTGTGCTCAACACAATCAGAGTCTCCACTTCTGGAGAACTCTCATGGTGCGTCTTCTACTTTATCTAAAATTCCTACCAATGATAAAGTAGAAATAGATTCCACGACTGAATCTGACATTTCCACTGAAAGAAGAGGACTTGTGTGTTCATCCATGGATGGTAAAGAAAAACTGGAGTCCCCTGGGATCAATGAAACCTGCTCTTCACCTGAACAATCAGCACATGCTCACTCACCAGAACCAGTTGTAATTCACTCACCTATTGGTTACAGCATCAGCGCATCACCTACTAATGAAACAACAGTTTCTTCAAGTGACCGTGAAGCCTCATTGTCCCCCTCGGTAGTCACTAGAACTGAATACAGTGATATCTGCTCTTCTCCTGATCATTCAGAACCCATCATTGACTCACCTCTGGGTTACACCATCAGCCCGTCACCTACAAATGAGAGAGAGGTTTATTCAACCGAACCTGAAGCCTCAATATCTCCTTGCTGTCACAGTGATATCTACTCTACCTCTGATAACTCTGTTTCAGCTCACTCACCAGAACCTACAGCAATTCATTCACCTATGAGTTTTACCATCAGCCCATCTCCCACAAACCTGAGAATGGTTTATTTTATGGAACCTGATGACCAACCGTCCTCTCCTGCCTTCACAGGTACTGATTACATTGCAACACCAACATGCAGTAGAGATTCTACACCTGCATTAAGGAGCATGACATCCACTCCAAACAGCAGAGAAAACTATCTTACACCCGAGCCCACTTCTCCAGCCCCGTCTCCAGAATTGAGCTCAGTCACCTGCTTACCTGAAATCAAAACAATATCATATAATATTCTGCCACAAAATACAAAATCCCCTACAATTGAAGGCATCGATTATAACATTTCGCCTAGCAAAGATTTAGCACAATCATCTGGAGTAGATGCAACTCTTTGCAGAAACTCTTCTGTAGCTTCAAATTCCCCCTTTGAAAATCATACCTCAGTTTCACCTAGTTCAAGAAACTTTTTGTCAACACCAGAGAGTAGATCTAGGCCCTCATCAAAGGCATCGGAACATTCTAGAGACACAGGATTATCACCTGCGCCCTCCATGCCAATTGTGAAGATAGAAAATCAGCATTCACCTATAATCATTGAGGGAATCAAGCCACCTTCTCATAGCCCAATAGATAGTCATTATTTAAATGACCATGTTGAAGCAGACACCTTGAAAAGCAGCACATCTGTCCAGGATGAATATACAGGAGGTGCACCAGAAGTTCTTAGCCAACTGAAGAACTTGAAAGATTCTTCATGTGAACTCGCAGATTCTGGATTGTCCACAGTAAGTATTGATAAACATCAGGATATTGTTACTGACAACACAAGAAATGTATCTGTCTGTGGAACATCAGTTTCTCTGAGTCCATTTGATGCAATGGCATTGACATCTGCAGAGGAGAAACAATACCATGGTAATATTGATGATCACAACGAGAGAATTGAAACATTGAAAAATGATTCCCCAAGTAGTAACCAAGTGACTGCAGAAATAAGTGAAATGCCAATGGTTATCAATAGGGACAATGATGGTGAATTTGACAGCAAGGAAAAGGAGGAGAGTGGAAAGAGGGAGGGAGAAGGGGAGGAGACTATAGGAGACAGTAGTTACAGAGGGGAACAGGTTGAGCTGTCATTCAGTGCCAGGAATAGAAAAGGGCCTGCAGGCCACAGCCCAGCTCTCTCAAGTCGAGACCCAAAGTCGGGAATTCCAGCTCGCTGTTATTTTGAGTCACCCCCAACAACTCTCCAGCAACAGAGTCAGCTCAGAGCTCGGGGCTCACATCAAGAGAACAAGGGTGGCGCCAGAAGGCTCCGGTCAGCTGCCCAGGGTAAATACAGCAGTCCAGGCTTTTTTCCTCCTGAGTGTACTGGCGAGAACTCCATCATGGGAAGTGAGTTTGATGAAGCAGACAATGAAGTGAAGTGGTTTACAGATCTGGCCTTCAGAAGCCTGTCTAGCCCTCAGGTGGATTATTTGGATGTGTACAACTCAAGCCACAGGTCATCAACGAATGTTTCTCAGCCATCAACTGTAGACAGCCCTGGTGCTGTCGCATGGATGAGCTATGCAGATTTACGTGGTTCAACGTTACATGAAAATGATGGCTATGCATTTTTACCACGTGATGGCCTGGACCCAAACAAACACTTTGAAATGGGAAATTTTGAATGTGTGGATGTTGCTTTAGAGAACAAGGAAGAATCCAATAAAGGAAAAAGGACTGTACCAAAAAGGCAGATTCAGCTCTTAAGGCGTAACACAGATGAAGCAAAACCGAATGGGAATACTGAAAATGTTTCTACTTCACCCTCTACACACAGACACTCAAGGGACACAATTGTTCGTCAACACAGCACACCAGCTTTTGTTCAAGAGAAGGTTTTCAGGGAGGTTCCAAATTCACCACAAAGTGACAGGAAAAGGACATTGCAGAAATCTGTGTCTCTAGATGATGGCTCCCCTAAGACGCAAATGGCGTCTTGCATTATCAAGAGTGTGTTGTCTAAGAGAATGCAGGATGTGCAGAAAGCTACACCAAAAAGTCCCAAGTTCGAAGACCCAAGTTCGTCTGGAGATAAAAACAAACATGATGATATTAGCCCCAGCTTTTTTGATGATGTACCAAGTAATACAGAGAAGCATAGCTTAAGCTCTAGCCAGCTTTCCGAATGCACTCTTTCATCTGAAGAATTTGCTGTCAGAGAAGAAAGAATTCCACAACAGGTTAAGAAGTGTGCCCCAAAAGTTCCTCCAAAACCTTTGTTCAGACCTGCATTCTTTAATGAAGAAACAAAACCTATAGTGTCCTCTCCACCGGCTGATGAAAAAGTACTTATGAAACACAACAATAAGACTGATGAAAAGGAGGGAGGAGGTGACAACCACGAAGAGAAATACAATTGTGACTCATCAAATGCCAGTGTCAGGAACACAAGTCCTGCTACTGCCCCTCCAGCAATAAGCATGCAGAACAAAATGACAAGCAGAGACAAAAAGCATCAGATGACAACAGAAAACCAGGAACAACTGCCTGCAAAGAGTGTATTTATGTCAAAGACACCAGAAATTACTTTGAAACCTTCCGCTATCAAAGGAAAAAAGACTTCTTTGAAAGTGTCTTTATCCCCTGACCTGGAACAATCTAGAGAAATATCTAAAACTAAGTCAGTGGAGAAAGCTCCAGAAGATGTGAGCACCAGATGTACAAAAGCCATGGAGATGGAAGAAGTTGATGACATCAACAAAAAGTCTGTTATACACAAAGTTAGGGATGTAAGAAAGTTAGTAAAAAACACATACAACCTGTCTTTCAAAGCGTCGAATTCAACCTCTACTGCAGAAGAAATTGTTGttcaagagaaaaaagaaaagccaccACAAACTCCTCCAGCCTTGCTCATTGAATGTAAAGCCATCAGTTGGAAGGACAAACAAACACCAGGCAGCAAAGCAATCCAATGGCATGATGAAAAACAGCCTGTTGACATATCAAAAATATCACAACCACGGGTGGGTGCAGAGACCAGAAGAGATGCTGACATCACTGAAATACCTTCCAAAGGCTCATCACTAGATACTGAGCCACAACAAAAAACTTCAGATTCTCTCTCTGAAACCATAGATGCATCAGAATCTGTAATTAAGAGACCTTATGTTCACTGTGATCCAAGTGCCAAGATGCCCCCTAGACCCCCCAGCAAGGAGAGGGAAGTTTCTGCTATGGTGGTTTTGCCAAATAGCATTCCCAAGGCAAAGACATTTGACACTTCAATCCCTGCCTCCACTCAAATGAAAGGTACAAACAGCAGCCATTCTGTATCAATGCTACTGAAAGAGAAAGGGATGCAGGCTGATATTGGAGTTTGTGACGTTCATACCGAGGGTGCAAGTTCTAGAGCTAAACATATCAACAGACTTGAGGTACCTGTACAAGCCTGTTTATCAGAAGGAATTTTAAATGAAGCACAAGTAAGGGCAGACAATACAGCAGTGCCTTGCAATTCATCAGTTTTTGTCAACAATTATTCAAGGACAGCCAGACAAAGTGAGAGTCCCAAGGGAACACTGTCTGAAGAATCTTTGACAAaggaacaagaaaaaaagaaaatcaccaCAACTGTAACAAAAATTCCAGCTTATCTAGCAACATCTGGCAAGCCAGAGGTGAGATCTTTTTCAAGTAATACAAAAAATAACGCTACAACAGCGAACACATCAAAAGAGATTGAACTACCAATACAAGTAAGGTCAGTATCCACTGATAAAGTAAAGCCATTTGTAACACCAAAACTCAGCTGTAAACAGTCATTTGCTGAAATTAAGTCAGTGTCAAATGATCCaccaaaaacagaaaaacaagcatCATCTGTCATTAAACAGCAAACCAGATTGTGTAGTGAATCTAAGAAAAGTGAAACTCAATCAACACTAATACACAAGGATCAATTACATGACGCTTTATCAAAAGATACAAAAAGACTTGCTGTATCGGCTATATCAAGCTACAAACCACCAGCAACTTCAAGTACTGTGCAGAAATCTACTACAGTGACATTGGCCAGTCTGGATCAACAGCAATCATCTGCTGATATGCAAACCACCAGCACATGCCAACAACAGGTCTCATCGTTCAATCAAGATCACTCAGTGCCAGACGGGTCCTTTGTTTCTAACCAATTAGGATCGCAAACCCTTGGTGACACACAATCTGTGGCAAGAACATCATCTAATAATCATTTTCACAAAGATGACTATCTTTTCTATGCATCAGATGATCCCCCCAGTTATGATGAGAGAGAGAGTTTCAGCCCTCTGCGAGTGTCAGATTTGCCGCCACAAAGGCCATGCAAGTATCATCCATCCACTAAGCAATCTACATGCTCCTGCCCACCAGGATCCCAATCACATCAAGGACATCCTCATCACAGTCCTCTGGAACGGGTACCAGTAGCCTCTAGGTCTCCAGGCCAAGTTCTTACCTGTCCAGGAGCTCCCCCACAAGCTCAAGTTCGTCCTCATCAATGCAGACCAGATGGTCTTCAAGTCTCCAATACTTCAGTTCCCCATGCCTCAGCTTTGATTCAGCCTCTGCACAACCCAAGAGCTTGTCCCGCTTCAAATTCACAGTCCTATGTTAATGACCAGCCACCAACTTCTGGACTGCATGCGGAGAGGCGACCAGCTAATCATCCTTCACCTAAAGCTGCAGCTCCTGCTTCTTATCACGAATACTCTCATTCAAGTAACATGTCCGCTCTGGATCCCAGGTCTCAGTTATTTAATCCACAAGATTTGCCACCATCTTTTGGTCACGATTATGCAAATGAAGGTCCAGGTGGAGCAGGTGTGTTGTATCCAGAAAATGCTAGTGGGCTCAGCTGTGGCCAAGGTCCTCGTCGTGTCCTTCTGGATCCCGAGACTGGTAAATACTTCTACATTGAGGTTCCAATGCAGCCACTCAGAAAAATGCTATTTGATCCTGAATTGGGACAGTATGTGGAAGTTCTCATACCGCAGCAGACAATGCCACACACAGGGATGTACCCACCAGCTGTACCACCTTACTCTTCTTTGCACAGTCCTGGGTTGTATGCACCACAGTACCTACCTTATGCAATGCCATCTTTCCCAGCAATCCCAGGCAATGCCCAGCAAGGTCGCCATCCTGAACCACCATCTGTCCCAACAACACTTCACCAGACTTCCTTAAGGTATGGAAGCCCTGGGGGCCAAATGCCAAAAAATGAAGCCAAAGGCCACTCGTTGCTGGATCAGGGCTATCTAGAAAGCATGTATTACATGCCAACTGGGATGAATGCAAGCCCAAACTCAACCGCTTCAGACTGTTACCACAAACCATCTTCAAGTATGCCTCCTTCAGGGGGAAGAAGAGCATGAAACAGCAGCAGATACATTTGTAATCATTTTTTCTGTTTGCTCTTTTTCCTGAAATATGATATAACATTGTCGTCATTTAGTAATAtaatttcactttcatttatATCACCTCACCTTCCTTGTATAGGCCAAGTTTATTCAGTGATGGGCCTTCTTTTCCAAAAGCTGCCATTGTTCAATCAATAGTGTTTCCCTTGAACACTGTTAAGTTATATAAGCGGATTATGCAGCTATAATATTAATGTGTTTGATCTTTTTACTTCTATTGAAATGACACTATTTATCAATGTTTAACATAACATGTAACTGCTTTGTGCAACACATTTAatgtacatatactgtacatgtgaGTAGATGAAAAGAATGTGGATTAGCAAGATCCACTAATTCACTTGTATGAAAATCACAGACATTTTCTGTCATCAAAAGATTGCCATTTACTATTTTTTACACATGGATACACCCCATTAAAGTTCACTACAAAACT

Function

symbol description
si:ch73-43g23.1 Is expressed in myotome and somite.

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041111-305 Is expressed in myotome and somite.

Ensembl:

ensembl_id ENSDARG00000100596

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00015090 True 8108 mRNA 0.43 2 7120620 7128980
Loading

Neighbor

gene id symbol gene type direction distance location
XLOC_007694 rufy1 coding downstream 75611 7016934 ~ 7045009 (-)
XLOC_007693 eif4ebp3l coding downstream 132971 6972868 ~ 6987649 (-)
XLOC_007692 clk4a coding downstream 176686 6933400 ~ 6943934 (-)
XLOC_007691 si:ch211-266k2.1 coding downstream 188731 6928500 ~ 6931889 (-)
XLOC_007690 NA coding downstream 392903 6623450 ~ 6727717 (-)
XLOC_007696 trpt1 coding upstream 836 7129816 ~ 7141550 (-)
XLOC_007697 stox2b coding upstream 39467 7168447 ~ 7245971 (-)
XLOC_007698 si:ch211-51f19.1 coding upstream 176706 7305686 ~ 7306983 (-)
XLOC_007699 trappc11 coding upstream 191968 7320948 ~ 7375049 (-)
XLOC_007700 BX890601.1 coding upstream 232769 7361749 ~ 7361865 (-)
XLOC_007641 CU855896.1 misc downstream 4712780 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 4713189 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 4713548 2406945 ~ 2407072 (-)
XLOC_007688 CT009487.1 non-coding downstream 641217 6462273 ~ 6479403 (-)
XLOC_007687 NA non-coding downstream 717851 6330241 ~ 6402769 (-)
XLOC_007684 NA non-coding downstream 916616 6193249 ~ 6204004 (-)
XLOC_007683 FP103005.1 non-coding downstream 933787 6186714 ~ 6186833 (-)
XLOC_007702 NA non-coding upstream 391121 7520101 ~ 7523786 (-)
XLOC_007703 NA non-coding upstream 395325 7524305 ~ 7533138 (-)
XLOC_007704 si:ch211-39i2.2 non-coding upstream 595896 7724876 ~ 7744153 (-)
XLOC_007707 NA non-coding upstream 834296 7963276 ~ 7967479 (-)

Expression

Expression of XLOC_007695(si:ch73-43g23.1) in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
End of interactive chart.

Expression of XLOC_007695(si:ch73-43g23.1) in the Zebrafish Sample of PRJEB12982

Bar chart with 360 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location