CI01000013_03501267_03503856


Basic Information

Item Value
gene id CI01000013_03501267_03503856
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3501267 ~ 3504388 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_03501267_03503856.mRNA
ATGAGTCATGCATTTAAAAACTGTTCAAACTTAATGGTCACCGGAGCCAGTCGAGGCCTCGGGCTGCAGATAGTTGAGAGTCTAGTAACGGGAGGCTTTTCTCCCGGGAAGATTATCGCTACTGCTCGGAATCCAGATGGAGCCAAGGAATTGCAAAAGTTGGCAGAAGAGCATCAAAACATACACATTATTAAACTAGATGTCATCAGTCAAGAGAGTATAGAAAGAGCAGCATCTGAGGTGGAACAGCTAGTTCAAGAGGAGGGTCTCAACTGTCTCATCAACAATGCTGGAATTAATGTTGTAGCAAACCTAGAGACAGTCACTGCAGACAAGATGTTGGAAAACTTCCATACCAACTCTGTTGCACCATTGATGATCACTAAGGCCATGCTCCCACTGCTGAAGCGAGCAGCTGCAAAGGGAACAGGGATGGGCATCCACAGAGCAGCAGTCATCAATATGACATCACTGCTGGGTTCAGTTGAGCTCTACTGGGGTGATCGTGCCGACACTTTCAAATGGTACCCCTACAGAACATCAAAGGTTTGTGATATTGTGTTTCTGGAGCTCAACGCCAAGAGTGCACTGAACATGGTCACCAGATGCTTGGCAGTGGACCTAGAGGCAGATGGGATCCTGTGTATGGCTCTGCATCCAGGCTGGGTACGCACTGATATGGGTGGACCTGAAGCACTGTTGAGCCCTGAAGAAAGCATATCCTCTGTATTGTCTGTGATTGGTGGTTTGTCTGAAAAGGATCATGGGTCATTTCTTCACTACACTGGTGAACAACTTCCCTGGTGATTCTGCAGATGATTTTTAGATGCGAGCAATAGAAGCTTTGTTTTCTTTTTGCTGCATATATGTACTGTATATATTTACATATTTAATAATCTACATTCTGGTTCAGGGTTATTTTTATCTTCCTTGCTTATGTAATGTTACTTTAATATTTTGGATGGTGTGGATGTGACAGTAATTGGAGTGGATCATGATTAAATAATTATTGTCAACTTGGCATTAAAAGCACTGAAATGATGATGACATCTTGCCTGGTAAATTATGAACAAATTTTTCACCACTTATTCTTGTTTACAAGCAGACAATTCTGAATGTTACTCACAATTTAAACCATATTTGTGAATTACAGCAGGGTATTTGTGTTTAGTCCTCGGAAAAGGACAAAAAGCAAGCTTTCTCCCTATTTAATATTTATTTATTGTTTTGTAACGCATAAAATGTGTCGTAGAATGCTTTTCATATTAAATATTGTATTGACATTAAATAAATATTTTTCTTAACATTTATATTATATCATAAAACTGCACATGTATGA

Function

NR:

description
Zgc:110339

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_03501267_03503856.mRNA True 1339 mRNA 0.40 6 3501267 3504388

Neighbor

gene id symbol gene type direction distance location
CI01000013_03493064_03499971 GOT2, GOT2A, GOT2B coding upstream 1136 3493064 ~ 3500131 (+)
CI01000013_03477151_03488842 CALB2, CALB2A coding upstream 11934 3477040 ~ 3489333 (+)
CI01000013_03457529_03463949 PNP6 coding upstream 36256 3457529 ~ 3465011 (+)
CI01000013_03262979_03269729 SLC38A8A coding upstream 231385 3262979 ~ 3269882 (+)
CI01000013_03241607_03258684 MBTPS1 coding upstream 242064 3241607 ~ 3259203 (+)
CI01000013_03505522_03510594 NA coding downstream 1134 3505522 ~ 3510717 (+)
CI01000013_03565240_03566364 NA coding downstream 60748 3565136 ~ 3566551 (+)
CI01000013_03570185_03581155 NA coding downstream 65701 3570089 ~ 3581729 (+)
CI01000013_03617490_03705093 IGF1R, IGF1RA coding downstream 113102 3617490 ~ 3705093 (+)
CI01000013_03715150_03721616 SYNM coding downstream 210762 3715150 ~ 3721731 (+)
G80003 NA non-coding upstream 89262 3411495 ~ 3412005 (+)
G79994 NA non-coding upstream 110941 3389945 ~ 3390326 (+)
G79976 NA non-coding upstream 127024 3373928 ~ 3374243 (+)
G79909 NA non-coding upstream 135374 3365542 ~ 3365893 (+)
G79639 NA non-coding upstream 298954 3201911 ~ 3202313 (+)
G80058 NA non-coding downstream 26047 3530435 ~ 3530847 (+)
G80041 NA non-coding downstream 97975 3602363 ~ 3652575 (+)
G80040 NA non-coding downstream 202335 3706723 ~ 3708228 (+)
G80037 NA non-coding downstream 204569 3708957 ~ 3712091 (+)
G80068 NA non-coding downstream 208588 3712976 ~ 3713187 (+)
G79309 NA other upstream 1034096 2466765 ~ 2467171 (+)
G77695 NA other upstream 2548298 946521 ~ 952969 (+)
G77533 NA other upstream 2791718 708833 ~ 709549 (+)
G80062 NA other downstream 79620 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 560545 4050837 ~ 4065829 (+)
G80845 NA other downstream 1330690 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 2551910 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 2574174 6075400 ~ 6081684 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_013404 si:dkey-12e7.4 coding NC_007129.7 CM002902.2 21171465 ~ 21177674 (-)