CI01000013_03565240_03566364


Basic Information

Item Value
gene id CI01000013_03565240_03566364
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3565136 ~ 3566551 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_03565240_03566364.mRNA
ATATATATATGACATTTTGTTTTCTGTAAGGTGCAGTCAAACATCTCTCAGTGAGAGAGCAAGACAAAGGATGATCTTGAAGATTTAACCAAGCACTGAGCATCATGCCTCAACGGAAGAGAGCCCTTGTTCCCATTAATACAAGGAGAAGGGTTAAAGGTGATGAAGATTACTTCCCTTTCAACTCCCTACCGGTGGAATGTCAGCTCCATGTGCTCTCGTTCCTGAGTGAGGTGGATAAATGCAACGCTGCTCTTGTGTGTGCAAGCTGGAGTTGCTTAGTGCGCTCCGGAAAGCTCTGGAGAGTCGCAGACTATTCTCGCCGTGGAGTGTTTCATCTGGGCCAGGAGGGTCTGCTCGTTTCCAACAGGGAGTTTGAGCGCTGGAAAGCTTGGGTTAACCATTACACCCATCATCTTATATCCCGTGGGGCTAGTTTGCTCACTCTGAAGGCCAGTTTTGATCTAGGGGACCCGTGCAATAAATGGGGAGAGCTCCTATCACACCTTCTAGAGAACGTGCATTGCCGTGATCTCAGTCATTTAGATCTGAACTGGACATTTACGCTGCTGGAGCCCCTCGACCTTCGTGTTCACACCAGTTCTAGTTCTCACCAAGACAATATTACCAAGATGGACCAGGTTAATAACTTCCAGATTCTCCTGACCAGACTCGTCCACAGCTGTCCCAGGATAACCAAAATGCGGCTGCACTTCGACTGGTCTGAAACATCAGTTACGCTGATCACTCAGTTTCAACACCTTCGTATCTTAGAACTGAAGTATTTTTGGGTATTCAAAGGGGTCAGCCCAAACACTTTACAGACACTGACGAAATCACTCCCTAATCTAAAGTCCCTTACGCTCCATGTTCTTGTACCACTGCGAAATTTAGGCATCTCGTACACCCTCGAATCGCTTTCGCTCGAGTTCTTGGATGTGTCGCCCAGTCGCGGTCTGGTCTTCTCCTGCCTCAACCTTCCAGCGCTGCGAGAGCTGCGGGCGAAGAAGATCGTTCGGGGCATTACTCTGGACCGCCGGACTCGACTACGCATACAGAGCCGATGGCCTTGCTTGTATCAGGTCTTACGTGAAGGGACGCCCAAACTTCAGGCCCTTAACAATGAAAGACTCCTTCCCAACTGGAAAGAGCAAAGTTACAGAGAGCTGACGTCAATCCTCCAGCAGTCTTGCTATTGCCTTCAGCATTTAGACAGCTGGCTCTGGTGAAGTCGAGACTTAAACAATCACAGGCCGCACATTAATGGCCTGAAGGGACACGACCACATCCTGAAGAAAAACATTAGAAGGACCAAAAATATAATCAGATAACACAATTCTGATCCTCTCTAATGAAAATTATTTAACGCTGTAAATTAATTATACATCAGCCACCCCTTGCTAGGAAATAATTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_03565240_03566364.mRNA True 1416 mRNA 0.47 1 3565136 3566551

Neighbor

gene id symbol gene type direction distance location
CI01000013_03505522_03510594 NA coding upstream 54419 3505522 ~ 3510717 (+)
CI01000013_03501267_03503856 NA coding upstream 60748 3501267 ~ 3504388 (+)
CI01000013_03493064_03499971 GOT2, GOT2A, GOT2B coding upstream 65005 3493064 ~ 3500131 (+)
CI01000013_03477151_03488842 CALB2, CALB2A coding upstream 75803 3477040 ~ 3489333 (+)
CI01000013_03457529_03463949 PNP6 coding upstream 100125 3457529 ~ 3465011 (+)
CI01000013_03570185_03581155 NA coding downstream 3538 3570089 ~ 3581729 (+)
CI01000013_03617490_03705093 IGF1R, IGF1RA coding downstream 50939 3617490 ~ 3705093 (+)
CI01000013_03715150_03721616 SYNM coding downstream 148599 3715150 ~ 3721731 (+)
CI01000013_03744519_03787129 CTTNBP2 coding downstream 177968 3744519 ~ 3788177 (+)
CI01000013_03823326_03839656 ASZ1 coding downstream 256775 3823326 ~ 3839910 (+)
G80058 NA non-coding upstream 34289 3530435 ~ 3530847 (+)
G80003 NA non-coding upstream 153131 3411495 ~ 3412005 (+)
G79994 NA non-coding upstream 174810 3389945 ~ 3390326 (+)
G79976 NA non-coding upstream 190893 3373928 ~ 3374243 (+)
G79909 NA non-coding upstream 199243 3365542 ~ 3365893 (+)
G80041 NA non-coding downstream 35812 3602363 ~ 3652575 (+)
G80040 NA non-coding downstream 140172 3706723 ~ 3708228 (+)
G80037 NA non-coding downstream 142406 3708957 ~ 3712091 (+)
G80068 NA non-coding downstream 146425 3712976 ~ 3713187 (+)
G80069 NA non-coding downstream 146746 3713297 ~ 3713517 (+)
G79309 NA other upstream 1097965 2466765 ~ 2467171 (+)
G77695 NA other upstream 2612167 946521 ~ 952969 (+)
G77533 NA other upstream 2855587 708833 ~ 709549 (+)
G80062 NA other downstream 17457 3584008 ~ 3584784 (+)
CI01000013_04051081_04064651 NA other downstream 498382 4050837 ~ 4065829 (+)
G80845 NA other downstream 1268527 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 2489747 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 2512011 6075400 ~ 6081684 (+)

Expression


Co-expression Network