CI01000013_03823326_03839656 (ASZ1)


Basic Information

Item Value
gene id CI01000013_03823326_03839656
gene name ASZ1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 3823326 ~ 3839910 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_03823326_03839656.mRNA
ATGTTAAACGAGATTGGCTATGCCTTTCCTGCTGGGGATGAAAGTGATGGGAGTAACGACGAGTGGGACATTGGATATTCTGATAATAACAAAAAAACGTGCGCTGAGTTCTCAGGTCAAGCGCATTTGAATGGAGAAGATAAAGTATCCACCTTGAAAAGAGCCATTACTGCAGGAAATGTCGACCTGGTGCGCGAGCTCTTGGACGGGGGTCTGGACGTTGAGACGCGGCTTGGCTTTGGTTGGACTCCTCTCATGTGCGCTGTCCATGTGGCCCACTATGAGCTCGCTGAGCTGCTGCTGGATCATGGCGCAAGCGCAAACTTCAGCAGAGCAACGTCTGCCTCAGAAGAGATGATCTGCAGGTGTGTGGCTCTGCTGCTCAGTCGCAACGCTGACCCGAATGTCTGCAACAGGAGCAGTATGACGTGTCTGATGCTGGCTGCCAGAGATGGCTATTGTCAGCTGATTAATTTGCTGGTGTCACATGGAGCAGAGCTGAACTTTCAGAACGAAAATGGACATACGGCCCTCATAATAGCAGTGCAGTACGGACACCAAGGAGCCGTGTTGAAACTGCTTCAACTAGGAGCGGATAAGTCCATCAAAACCAAAACAGGGAAGACGCCAGCTGACATGGCCAAAGTTTTCAATTACCCTGAGATCTCCAGGATCTTTGATTCTCCAGAGCTCTCTACTGCAAATGCCAATGCACAGTCCAAAGCTGAGGCACTGTTTAAATTTCTCAAACAAAACCCTCATTCTCACTCTGCCTGCAAAGAGAGTTGTTCTAAGCTGAGTGATATTGAACTGCTGCTGCATGGTCTGAATCTGGATTATCTCTCAGACATCATGGTGGATCATGATGTCACTTGGAGTGACTTACTGATCATGGAGAAGGGAGATTTAGAAAAGATTGGAGTAACTGATCCTGAGGATCAAAAGAAGATTCTCAGTGCCATGGAGCAGATGCACCTTGATAAAGTAGATCTGGACACCCTGACGCCTCTTAATAACATAGACAGCGGGAGTGAAGATTTCCTTAACTTTCTGATCAGCCTGAAACAGCAGTGCTGTTACTTGACAGAAACCTTACAGGATGTCATCAGCAGGTTCCCACGTAGCCCCTCTGAGGTTGTTCTCACATGTGATCCCAAGAAAGAAGCTCAAGCCCTTTGCACTGAGCTAGTAACTCAGACAGGAGACCTTCAGAAAGAGATACTCTGTCTAAAGACCCTGCTCAGCAAGCTGCTTGTTGCTCCTGGTGTTCTCAAAGCATTCAGCATTTTATTGTGCCAGACTATCAAAATAGAAATGCCTAAATACAACACTTTGTTAGATAGTGTGTTGTCTTTAGTCATAAACAACATTCCACTACACCATATAATGGATACTGATGTTGTGAAATACTGGGTTTTTGGATGGTTTTTCACTGAAATCTAGAGACAATCAGTAATTAGTTTTGTTTAACAAAACAATAATATTAGCATAACATGTTAAAATGAATTCCAAAATGATTTATTCTATTTTAACCATTAATTTTCCCTTAGACGGATCACACAGAATATACCTTTCAGCCTCTTCAACCAAACTCCAGAATTGGTCAGCGAGGAAAGGCCCGCAAGAGGTTTGCTGCTGTGCTTGGACTTGGAATGTTTGGAGCAGGGCTGCTATTTGTGTTGTCACAATCCAAAAAA

Function

symbol description
asz1 Predicted to be involved in piRNA metabolic process. Predicted to act upstream of or within several processes, including gene silencing by RNA; meiotic cell cycle; and spermatogenesis. Predicted to be located in cytoplasm and membrane. Predicted to be integral component of membrane. Predicted to be active in pi-body. Is expressed in oocyte stage I. Orthologous to human ASZ1 (ankyrin repeat, SAM and basic leucine zipper domain containing 1).

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K18410 ASZ1, GASZ; ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_03823326_03839656.mRNA True 1697 mRNA 0.45 13 3823326 3839910

Neighbor

gene id symbol gene type direction distance location
CI01000013_03744519_03787129 CTTNBP2 coding upstream 35149 3744519 ~ 3788177 (+)
CI01000013_03715150_03721616 SYNM coding upstream 101595 3715150 ~ 3721731 (+)
CI01000013_03617490_03705093 IGF1R, IGF1RA coding upstream 118233 3617490 ~ 3705093 (+)
CI01000013_03570185_03581155 NA coding upstream 241597 3570089 ~ 3581729 (+)
CI01000013_03565240_03566364 NA coding upstream 256775 3565136 ~ 3566551 (+)
CI01000013_03843207_03852634 WNT2 coding downstream 3297 3843207 ~ 3854025 (+)
CI01000013_03856173_03872356 BCL2L13 coding downstream 16263 3856173 ~ 3872947 (+)
CI01000013_03885988_03895027 KIAA1147 coding downstream 46078 3885988 ~ 3895027 (+)
CI01000013_03902606_03908849 IGHMBP2 coding downstream 62696 3902606 ~ 3909058 (+)
CI01000013_03937929_03938255 FAM180B coding downstream 98019 3937929 ~ 3938261 (+)
G80088 NA non-coding upstream 16611 3806054 ~ 3806715 (+)
G80087 NA non-coding upstream 17856 3805215 ~ 3805470 (+)
G80083 NA non-coding upstream 29926 3793004 ~ 3793400 (+)
G80081 NA non-coding upstream 30445 3792667 ~ 3792881 (+)
G80075 NA non-coding upstream 82767 3740276 ~ 3740559 (+)
G80143 NA non-coding downstream 87260 3927170 ~ 3927724 (+)
G80144 NA non-coding downstream 88412 3928322 ~ 3928550 (+)
G80105 NA non-coding downstream 106894 3946804 ~ 3948697 (+)
CI01000013_03952621_03964132 KIF23 non-coding downstream 123338 3952621 ~ 3964234 (+)
G80153 NA non-coding downstream 170405 4010315 ~ 4010552 (+)
G80062 NA other upstream 238542 3584008 ~ 3584784 (+)
G79309 NA other upstream 1356155 2466765 ~ 2467171 (+)
G77695 NA other upstream 2870357 946521 ~ 952969 (+)
G77533 NA other upstream 3113777 708833 ~ 709549 (+)
CI01000013_04051081_04064651 NA other downstream 225023 4050837 ~ 4065829 (+)
G80845 NA other downstream 995168 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 2216388 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 2238652 6075400 ~ 6081684 (+)
G81994 NA other downstream 3496035 7335945 ~ 7338239 (+)

Expression


Co-expression Network