CI01000013_04084679_04088148


Basic Information

Item Value
gene id CI01000013_04084679_04088148
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4083814 ~ 4090171 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_04084679_04088148.mRNA
ATTTAAATCGCACCATATTCATTTAAAGTCAAACAAGTTATTCGGAAATTGGGCCCAAATGTCTGTAGTAGGGGTGTAATGGTACCCTCATGTCTGAACTCACGATCCGATATTATTGCGATACTCCAAAACATATGGTAATAGGATAACAAAAAATGTACTGTTGATTAAAATGTTAAATTTGGTATTACATTGGGGGTTGGAATGAATAGGCTTGGACTTGGTGCTGGTAACCCGATGCACAGGACAATGGTGACACCAGAATAAAAATATTCATGATTCTAACGCTGAAACACAGATTTATTTTAGTTGAATATGAATATTTAAAATAATGTAGGCCACTTTTTACTGGTAACATAAGACATTTGGCATTAGCAGGACCCACAAGTATTCCCCCATTGCATTATTATAAATTATATTCAACATTATATATAGTAGTTTAATGTAGTACTGACACTAAAACTCTGTAAACTTGAATTTTTTCCCCTCACACAGTAATTTTAATTTTCGGTGAACTATACACAACGCATTTTGTCACCATTCACGATACGATATTGTTGCATTTTTGTATTGCGATATATTGTGACACGATATATTGTGACACTCCTAGTCTGTAGGAATATTGACACCTTAACATTTGCATTCTGATGAGCCTTTACAACAGAACAGAAACTGTTCATCACAATAACGTGTCTAATGAACAAAGGTGGATTACGTCCAGAGCTGTCAGGAGCCAAGGCCTATTTTGCCTTCTCCAGACCCCACCTTTTTCATTTTCTCAGCAACCCACCCCCAAGTCCCTCCTTCATCTAGCCCACCGCAGGGACCCGACCTTCATTCTCTCTCCACCCGCCTGACCGTTGCCATGGCAACTGTAGCCGAGCAGGCCCCATCTCCTATCGCGCGCCGATCATTATGCAAATGGTACCTCAGCTTGACCGTAACAGCCTGTAAAATCATATTACGTGCACACAGGCAGGTCATTAAATTGAATTTTCGGCCTGTCGATCGGCTGAGTACCGCACACGAATGGTGGATAAAAAGGCGAGCAATAGCGGAGGATGATGTGGGGTCGTTCAGGAACACAGCACGGCCGACATCACAGCCTCTTCCACTGATGAAAGGAGCTCACATCACAGGTCTGGCACTGGCTTTGACTGAGACCAAAGGAGAAGGGGGAGGAAAGCCTCTGAAAAATAACTCGGCTACAGATACATCATCTATAGAATTTATGAGGCTCAGTTCAACCCAGGGCCAGAACGGAGCACAAACACATCACAGGGATTTCGGCTCTATTTTTCATTTCAATGGCAAACACGCAGCACTGCGCCGACCAGGAAATTATTTAGAACATATTGCCGAAAATGCCAAGCGGTTGCAGAAGCCAGACACAATTTTTTTTTTTACAAGATACTCTGTAACACCCAAGTACTCGGACCTGTCTAGCACCATTTCAAGAGCACTCCAGGGCCAGGCTGTCAATGGCGTGCTGAAAGCTATTTGTCTGTTGCCATCAGCGCCAGCGGAATGGAGTGAGACGCTGATGAGCATTGAATATAGAGGAAAACAACTGGCCCTTCCAGGCATGTATCAGATGCTAGCGTGCATCCTGAAATCCGCATTACTCCACGACTGTTTAAAATACAAAGTGCCTAGAGACCACCAAATGGATGAGGAAACAGATTGCCTAGCGGTCAGAATTAAATCCTCAGTGCTGAGAATAATGCGCTGCCAGTTGGGAGATAAGTGGTTAACAGGAGGCATCGCAGGGGCAAAAGGCCTGACAGAGAGAGGAGTGCAGAGACTCACACTGTGGACACTGATGGATCGGCATCCACCAGCTCCTCCCTGATGCCATTAACCTTCATAAGGTGGAGAAGGGGAGCAGGCTGAGAAAGCTGGGTTGTCTCTTAGGTGGCCTAACTACATCTGGTGCACAGCACAATCTCATTATTATCTAGGGGACAGGACATGTACGATGCGTCACAATAATGTCAGGACTAGGGCTGCACAATATATTGTTTCAGCATCAATATCATGATGTGCGCATCCACGATAGTCACATCGCAGGATGTTCGATGTCTAGTATAGGGATCATTAATCCATACGGTTCAAAACGCATCTGATTCTTGGATTAATTGCAAAGTTTGACCATCATACAATGAAAGTTTATCATTTGCATGTTTTAGGTCCTGTCAGCTTAAACATTCAAGCGCAAAGACGTGAAAGAGCACTCAATTCTAAATGTGCAGCTTTTTTCTGTGCGCGCACGGAGCCGCGCAGACGCATGTGAACACCGAATGCCCTTCTCTTCCGCTTCTATTTGTGCCTGAACGGACACATACATGCAAAAAAAATTGTCAAAATGAGCATAAAACATCGAGTATCCTCGTAAAACACAGTTGCTTATGGCTTAGGTGAACTAAATTAAGAAAGAAAACTGGATGTGTAACAGTATTTTGGATCGCGCATTCGGTCTTAAAGTGACAGCAGCCTAATATTCCTGCTGATTTCTGTGTCATGAATGTTAATAAAACAACAAAAGACAAAGAGAAAATAACTTTTGTAGTTTTAACACAGATGAATTATATTTAATTTATACAGTGAAGACTATGCAGTGTTATTTTACATTTGATTGTTCAATTTCTGTACCTGAATACTGTTAGGCTTACCTGAAAAATATAAAGCAGTATTTATTTTGTATCTTTGTTCTATTATATTTATCTACGCTTGTAATTTGTTCATTATTTTCTTTGTTTATTCATTTTCTTTGTTTATTCACTCACATACATAATCACCCCAATGATTTTAGAATGATTCTTTCCAAATAGAGCTATTCAAGTCATCTGGTGAAGTTTTTTTTATTTTTTTCCCATATCGCAATATATAAAATCGCAGACAAAACAATTTACCGCAATGTCATTTTTTTCCAGTATCATGCAGCGCTAGTCAGGACATCAGATTAGTCTTTGTAATTACAGTGGAAGAGTAACCTAAATTTAAAAAGACAATTTTGAAGTAGTAAGGTGGACGGAAATTAAGAAAGAAACAACTAATCTATAAAATCAATAGTTGATAACAATATGAAAACAGTCACTTAGTTCTTATGCTGTGCACAGATAACATTTGTTATTGATGTCACTTCGCAGTAGACAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAGAAAAATGGCAGAGGAGAGAAAAAAAGGTCACAACAATTTGCCCAATGCTTCAAAGAAGGTCATAATAGGTCATATAGTTTCATGTTGCTGGCTTCAGGCGCTTATTGGAAAAGACATGGAATATACGATTAAATCAAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_04084679_04088148.mRNA False 3326 mRNA 0.40 5 4083814 4089622

Neighbor

gene id symbol gene type direction distance location
CI01000013_04051081_04064651 NA coding upstream 18645 4050837 ~ 4065829 (+)
CI01000013_03952621_03964132 KIF23 coding upstream 119580 3952621 ~ 3964234 (+)
CI01000013_03949848_03950925 NA coding upstream 132521 3949848 ~ 3951293 (+)
CI01000013_03937929_03938255 FAM180B coding upstream 145553 3937929 ~ 3938261 (+)
CI01000013_03902606_03908849 IGHMBP2 coding upstream 174756 3902606 ~ 3909058 (+)
CI01000013_04316134_04317091 NA coding downstream 226512 4316134 ~ 4317198 (+)
CI01000013_04344339_04347938 AAGAB coding downstream 254717 4344339 ~ 4348083 (+)
CI01000013_04425884_04426805 NA coding downstream 336126 4425748 ~ 4427010 (+)
CI01000013_04505188_04527744 NA coding downstream 415523 4505145 ~ 4527872 (+)
CI01000013_04542059_04550082 LCTLB, LCTL coding downstream 452437 4542059 ~ 4550307 (+)
G80175 NA non-coding upstream 5438 4072562 ~ 4078376 (+)
G80174 NA non-coding upstream 21456 4062088 ~ 4062358 (+)
G80168 NA non-coding upstream 27755 4055833 ~ 4056059 (+)
G80153 NA non-coding upstream 73262 4010315 ~ 4010552 (+)
G80493 NA non-coding downstream 26537 4116159 ~ 4116382 (+)
G80505 NA non-coding downstream 37292 4126914 ~ 4127129 (+)
G80518 NA non-coding downstream 94050 4183672 ~ 4183892 (+)
G80506 NA non-coding downstream 116515 4206137 ~ 4206711 (+)
G80529 NA non-coding downstream 129026 4218648 ~ 4219031 (+)
G80062 NA other upstream 499030 3584008 ~ 3584784 (+)
G79309 NA other upstream 1616643 2466765 ~ 2467171 (+)
G77695 NA other upstream 3130845 946521 ~ 952969 (+)
G77533 NA other upstream 3374265 708833 ~ 709549 (+)
G80845 NA other downstream 745456 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 1966676 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 1988940 6075400 ~ 6081684 (+)
G81994 NA other downstream 3246323 7335945 ~ 7338239 (+)
G82168 NA other downstream 3938716 8028338 ~ 8041343 (+)

Expression


Co-expression Network