XLOC_000077


Basic Information

Item Value
gene id XLOC_000077
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 6759183 ~ 6760930 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003024
gcaaaggttggaaccagtgaccatcttgctgtgagatatttgACTGTAGACTTTCTGGATTGATCAGTGAATCATGACTCCACCAACACCAAGGTCATGAGTTCAATTTCCAGGGAGCACACatgaataatacaaaaaaaatgtctgaCAATAATTCAATCTAATGCTGATATCTTACGTTTTGGTGATTGAAGTAGTGTCCTTGATGTATGCAATGTAGTGACAGCATTGTTGATGAGCAATTTAGCTGTGTGCTATTTTCTAACACGCATGTGATTAAGCGGGTTGCATCAGTGATTCAGGCACACATTGGGCAGGGATTTCCTAGACTCTGCCCACATTCATAGTGAGAAGACAGCATGGCGCTGGGTAACAGGGTCTGGCAGGCTCAATACAATTTGGGCATGCGGTGAGTCTACAGATGGTTGGACAGCACAAGCCCCACAGAGTTGGCGCTCATGAGATCTCCATATTTTGATGCTCATCAGAAGACAATAACAACCCAGTCTCCTCTCGTTTTAATGTTGCAATGAAATCaaaattcttattttaatatgtattttatagtgCTTTTTAGAAACACTATCTGTGCTCTTCATTGTTTTCCAAATATTAATTTGTCCTCAGAATCTTTAATCCAATATAACAACCTCTCACC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003024 True 658 lncRNA 0.40 2 6759183 6760930

Neighbor

gene id symbol gene type direction distance location
XLOC_000076 NA coding upstream 90844 6665033 ~ 6668339 (+)
XLOC_000075 ube2f coding upstream 95060 6646529 ~ 6664123 (+)
XLOC_000074 si:ch211-93g23.2 coding upstream 112827 6640437 ~ 6646356 (+)
XLOC_000072 NA coding upstream 204713 6379878 ~ 6554470 (+)
XLOC_000073 NA coding upstream 355960 6398210 ~ 6403223 (+)
XLOC_000078 CU302223.1 coding downstream 26760 6787690 ~ 6787804 (+)
XLOC_000079 erbb4a coding downstream 56362 6817292 ~ 6925407 (+)
XLOC_000080 NA coding downstream 195983 6956913 ~ 6990027 (+)
XLOC_000081 CU929161.1 coding downstream 302907 7063837 ~ 7063943 (+)
XLOC_000082 CABZ01075319.1 coding downstream 331343 7092273 ~ 7115914 (+)
XLOC_000065 NA non-coding upstream 960091 5795013 ~ 5799092 (+)
XLOC_000064 NA non-coding upstream 1030499 5706970 ~ 5728684 (+)
XLOC_000084 NA non-coding downstream 751599 7512529 ~ 7512762 (+)

Expression


Co-expression Network