CI01000013_04657029_04672057 (MEGF11)


Basic Information

Item Value
gene id CI01000013_04657029_04672057
gene name MEGF11
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4656803 ~ 4672742 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_04657029_04672057.mRNA
GTTTAAATTTTGGGGGGTAATTTTGCCTTTTATTTGACAGTGTGAGGAGAGACATCCTGATTTTTGCTCTAAAAAATAGCCTCAGATTCTGACATGGCATGAAACAATTAATAAAATAAAATAAAAAAAATATATAGATTTTTCAGTGTCATATTTTTGGAGAATTTTGCCTTTATTTGACAGTTTGAGGAGAGACAGGAAGAGATATGAAGCACTGTTGCACAATATGTATGTGTGCTGCCCTCAAGGCTATGGATCTGACAAGAAACGGATTCTTGATAAAAACAGACGGCGTTTCCTGCCTTTAATGTGCCCTGGTCATTTGTGTGGTGTGAGAGCTCAACAGACAGGAGAACTCATCCGTGGCAGATTTACTCAAATCAATAACGTGCCTCCTGCCCTCTGTTGTGAAAGTGGCCACTGGGGGCCCCACTGCAGCAACCGCTGTCAGTGCAAGAATGGGGCACTGTGTAACCCCATCACAGGAGCCTGTGTCTGCACAGACGGCTACCAAGGCTGGCGCTGTGAGGATCAATGTGAGCCTGGCTACTATGGCAAGGGCTGCCAGCTGCAATGTCAATGCCTCAACGGTGCCACCTGCCACCACGAGACGGGGGAATGCATATGTGCACCAGGCTACATGGGCCCCATATGTGGAGAGCGCTGTCCCTCTGGAAGTCACGGCCCACAGTGTGAGCAGCGCTGCCCCTGTCAAAATGGAGGAACCTGCCATCACATCACTGGAGAATGCTCCTGCCCTGCTGGATGGACGGGGTCTGTGTGCGCCCAGCCATGCCCATTCGGAAAATATGGGATCAATTGCAGCAAGGAATGCTCATGCCGCAATGGAGGACTGTGTGACCACATCACAGGACAGTGCCAGTGTATGGCAGGATACAGTGGCCACAGGTGCCAGGAAGAGTGTCCGGTTGGCACCTACGGACCCCAGTGTGCCCTCCACTGTGACTGTCAGAATGGGGCCAAGTGTTACCACATCAACGGAGCGTGTTTGTGTGATACAGGATTTAAAGGGCCTCACTGCCAGGACAGGTTCTGTCCTCCAGGACTATACGGTCTCATCTGTGACAGATACTGCCCCTGTAACTCCACCAACACACTCAGCTGCCACCCCCTGACAGGTGAATGCTCGTGTACAGCGGGATGGACGGGTCTATACTGCAATGAGACCTGTCCCCCGGGTTACTATGGAGAAGGATGTAGTGTGCCGTGCCAGTGTGCTAATGGAGCAGACTGCCACGGTCTCACTGGGGCCTGTATCTGTGCCCCAGGCTACACAGGAGGCTGGGAACAAGATTTGAGGGGCCTGCTGCCAGTTCTATTAAACACTGCTCGAGGAGCTTTGGCCAAGGCGTCTGACCGAGATGCAATGGAATTGGGACACAATAATTTATTTCCAGGCCAGCTCTTCCATTTGGACCTATAGAACAGCAAAGGTTAACAATTTGACCGCAGTCTGGTTGAAAATAATAGGGGTAATGGCCACCAAAACTCTCATCCATAGAGTTCTGAGAGAGTGATATTTATAGGGGTGGGAAAGGAACATATATGCTTGTGCTGCTGGTACTGGAGAGAACGCAGGTGGGTAAATGAGGGACCAAATGTGCTGGTAGTACCACATTGAAAGCGCACATGCCACATTCATGAGTGCTTTCATGACACTTCACTAGAATGCACAGATGCACTAGTAGGAATTTTTTTAACGCTTTAAAATAATGTTCATTACCAAAATAACAGTCATTACCATAACACATTTAGTTATTGTATGAATGACCACTATAAGTGGTCTATTAATGCAGATTGTAACTGAAAAAATTAGATGAATTTAAGATATTGTCATGTTGTTATCCAGCATGATTTGAGAATTATCCCACATTTTCAATATGGTCTCAGACTTTTGGACCCCACTGGATATGAAAATGTACCAATCAAACCTTGAAGACATAGCTCTTTGAATGTACTACTGATCTTTGCTAATGTTATTATAAAGTGAATATTTAGCTTCAAAACTTAAGTCCTGCTTTAGCCTGCTTTTAGAGGAGTTTAGTCACCCAGTTGAATGAGTGCTCTCAGGCCTGTGTCAGTGTAATCTGGAGCATTCACGGGTCTCA

Function

symbol description
megf11 Predicted to enable zinc ion binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human MEGF11 (multiple EGF like domains 11).

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_04657029_04672057.mRNA True 2129 mRNA 0.47 9 4656803 4672742

Neighbor

gene id symbol gene type direction distance location
CI01000013_04612468_04618550 NA coding upstream 37803 4612054 ~ 4619000 (+)
CI01000013_04542059_04550082 LCTLB, LCTL coding upstream 106496 4542059 ~ 4550307 (+)
CI01000013_04505188_04527744 NA coding upstream 128931 4505145 ~ 4527872 (+)
CI01000013_04425884_04426805 NA coding upstream 229793 4425748 ~ 4427010 (+)
CI01000013_04344339_04347938 AAGAB coding upstream 308720 4344339 ~ 4348083 (+)
CI01000013_04673313_04707104 MEGF11 coding downstream 474 4673216 ~ 4707470 (+)
CI01000013_04720501_04724747 NA coding downstream 47759 4720501 ~ 4724940 (+)
CI01000013_04750261_04754885 NA coding downstream 77519 4750261 ~ 4756045 (+)
CI01000013_04760068_04760352 NA coding downstream 87265 4760007 ~ 4760374 (+)
CI01000013_04774039_04780331 VWA9 coding downstream 101297 4774039 ~ 4780762 (+)
G80826 NA non-coding upstream 78890 4577531 ~ 4577913 (+)
G80832 NA non-coding upstream 83471 4572802 ~ 4573332 (+)
G80831 NA non-coding upstream 84703 4571764 ~ 4572100 (+)
G80830 NA non-coding upstream 85250 4571198 ~ 4571553 (+)
G80829 NA non-coding upstream 89800 4566758 ~ 4567003 (+)
G80834 NA non-coding downstream 37065 4709807 ~ 4712529 (+)
G80875 NA non-coding downstream 45341 4718083 ~ 4718297 (+)
G80879 NA non-coding downstream 97568 4770310 ~ 4770538 (+)
G80842 NA non-coding downstream 143728 4816470 ~ 4818947 (+)
G80850 NA non-coding downstream 153576 4826318 ~ 4828164 (+)
CI01000013_04051081_04064651 NA other upstream 590974 4050837 ~ 4065829 (+)
G80062 NA other upstream 1072019 3584008 ~ 3584784 (+)
G79309 NA other upstream 2189632 2466765 ~ 2467171 (+)
G77695 NA other upstream 3703834 946521 ~ 952969 (+)
G77533 NA other upstream 3947254 708833 ~ 709549 (+)
G80845 NA other downstream 162336 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 1383556 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 1405820 6075400 ~ 6081684 (+)
G81994 NA other downstream 2663203 7335945 ~ 7338239 (+)
G82168 NA other downstream 3355596 8028338 ~ 8041343 (+)

Expression


Co-expression Network