CI01000013_04720501_04724747


Basic Information

Item Value
gene id CI01000013_04720501_04724747
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4720501 ~ 4724940 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_04720501_04724747.mRNA
ATGGCACATTTTGTTGGCAGTCACACCATTAATGAGAAAAATGTCCGTAAACCCTCTGTCAGGCCTCCCTGCTGTCCCAGAGCTGTGCAGTATCAGGAGCCTGTTGGTCCATGGAGCCCTTACTCAGGGCCACAGCCCAAAGCTCCAGCACAGCTGGATAAGATCATGCTCATTTTTATGAGCAGGCTGTTAAATTGGCTTATCCTGTGGCTTCTACACGCCACAGATCACATCATGGATCCACTCACAGCCTTTTGCAACTCAGATTTCTGTCCATTATGTGAGGCTGTTTTCCTATTCCGAGGCGTCATTCCGTTGCGTTGTGCTTTCTGTGCTGCGTGTACTGGAACTGTCCAGTCATTTAAACTGGAAAAGGGAACTATTGATCTCTTACTCCAATTCTTCAGAATGACGAGTATGAAGTTGGTGAAGGAGTTCCTTATTTCTGGTATGTCTCAGGCACGCAGTGTAATTTTCTTTCATGGCTTCTCCATGAATTTCCGCTGCGTAGGACCCATGCTGATTTCTCTGATGTAAGAGTCATTTCCAACGCACTTCCGGGCATTTTTGAGTCTCTCTTTTTGACGTTACCATGGTGTTTCTCAATAAGGGACTGACTTCCTACGAGATGTCTGAAAAGTGTTGAGTCAGTGCAAGAGTGTCTATAATTGCATCACATAACAATGAAATGTGCCTCAGGGCTTTCCAGAGTGCAATGTGCCTGACTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_04720501_04724747.mRNA True 730 mRNA 0.46 3 4720501 4724940

Neighbor

gene id symbol gene type direction distance location
CI01000013_04673313_04707104 MEGF11 coding upstream 13031 4673216 ~ 4707470 (+)
CI01000013_04657029_04672057 MEGF11 coding upstream 47759 4656803 ~ 4672742 (+)
CI01000013_04612468_04618550 NA coding upstream 101501 4612054 ~ 4619000 (+)
CI01000013_04542059_04550082 LCTLB, LCTL coding upstream 170194 4542059 ~ 4550307 (+)
CI01000013_04505188_04527744 NA coding upstream 192629 4505145 ~ 4527872 (+)
CI01000013_04750261_04754885 NA coding downstream 25321 4750261 ~ 4756045 (+)
CI01000013_04760068_04760352 NA coding downstream 35067 4760007 ~ 4760374 (+)
CI01000013_04774039_04780331 VWA9 coding downstream 49099 4774039 ~ 4780762 (+)
CI01000013_04788303_04790895 PPCDC coding downstream 63363 4788303 ~ 4791025 (+)
CI01000013_04805165_04810980 NA coding downstream 79539 4804479 ~ 4810980 (+)
G80875 NA non-coding upstream 2204 4718083 ~ 4718297 (+)
G80834 NA non-coding upstream 7972 4709807 ~ 4712529 (+)
G80826 NA non-coding upstream 142588 4577531 ~ 4577913 (+)
G80832 NA non-coding upstream 147169 4572802 ~ 4573332 (+)
G80831 NA non-coding upstream 148401 4571764 ~ 4572100 (+)
G80879 NA non-coding downstream 45370 4770310 ~ 4770538 (+)
G80842 NA non-coding downstream 91530 4816470 ~ 4818947 (+)
G80850 NA non-coding downstream 101378 4826318 ~ 4828164 (+)
G80893 NA non-coding downstream 124499 4849439 ~ 4849797 (+)
G80919 NA non-coding downstream 194043 4918983 ~ 4919289 (+)
CI01000013_04051081_04064651 NA other upstream 654672 4050837 ~ 4065829 (+)
G80062 NA other upstream 1135717 3584008 ~ 3584784 (+)
G79309 NA other upstream 2253330 2466765 ~ 2467171 (+)
G77695 NA other upstream 3767532 946521 ~ 952969 (+)
G77533 NA other upstream 4010952 708833 ~ 709549 (+)
G80845 NA other downstream 110138 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 1331358 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 1353622 6075400 ~ 6081684 (+)
G81994 NA other downstream 2611005 7335945 ~ 7338239 (+)
G82168 NA other downstream 3303398 8028338 ~ 8041343 (+)

Expression


Co-expression Network