CI01000013_04750261_04754885


Basic Information

Item Value
gene id CI01000013_04750261_04754885
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4750261 ~ 4756045 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_04750261_04754885.mRNA
GTGACCCTGATTGCTCCTCTCTGATCGAAAGCGATTCCTGTGTAGACCCCGATGGGCTCTCTTCCCCCCAGCGGGATGCCACCCAGCCTGTCACGCGGCCCAAACGGAGCCCTTACAGAAGCAACCACTGCCTAGAAAGCCCATCCGCACCACCTCGACTCTTCCGACAGTCCTCCCTCACTGGTCCATCGCTGACGATAACGAAAGCTCTGCAGACCTCAGACGTGTGTTCTGATTCCAGCCTCACTCAGTCCACGCAGAATTACGCCATTGAAGTACGTATGTCCAGTTGTTCACGCTGTAACACCTGTGAGAGTTTGGTGTATGATGAAGAGATCATGGCTGGTTGGACAGCTGACGACTCCAACCTCAATAGCACGTGCCCCTTTTGCGGCTCTCCGTTTCTGCCCCTGCTCAATGTGGACATTAGAAACCTGGGTGACCAGGAAAGATCCCCCTCTCAAGACACACATACTTGCCAGACAGACGCCGCAGATGAACTTTCACAAGTTTACGATGTCACTGGCAATCTGTCCAGCAATGGAAAAAAAGACCCTGAGCCAGTTACCGTGCCCTACCTGAGTCCTCTGGTACTTTGGAAAGAACTGGAGAGCTTGCTGGAAAACGAGGGAGACCAGGCCGTCTCGTCTGCAGCCATTGTGGATCACCACCCCATTGTGTTCTGGAATCTGGTGTGGTTTTTCCGTAGGCTGGACCTGCCTAGCAGCCTTCCGGGACTCTATCTGAGCTCCAAACACTACAGCAAAGATGTTCAGCCGCTGCAAAGTTGTGCATCAGAAGACAGTAAAAATGTCTTGGTTCAGATCCTGTGGGACAACCCCAGACTGCATCAGGACCCCATTCAGCCCTGCTACTTGCTCTGGAAATCATATTGTGCAAATCCTGCAGTATCTGCTGCCCTGTGGGAGGAGGAGCAGTCTGTGAGCTTAGAGCTGCTGCAGAGTGTCGTGAAGAGCATCCAGAGGAACGATGTCTATCAGCCCATGAGTCAGATACTGCAGGTACTGGGCACCAGACTGGGCTTCGTCAGACAACGGAGCTTATATAGAGACATCCTGTTCCTAGCTTTGGTGGCTTTGGGCAAAAGTAGCATAAATATCGATGCATTCGACCGTGAATACAAAATGGCATATGACCGTTTGACACCCAGCCAGGTCAAGATGACCCACAATTGTGACCGGCCACCCAGCGCTGGAGTCATGGAGTGCAAGAGAACCTTTGGGCTGCCCAATCTGTGATTCACCTCCTCTCATTCCTCCCTCTTTCCTCGCATTCATCGCACAGGAAGGCATCCTAGATGCCCAAGTCCCATCCAAAGAAGCAACACTTTCATTGATTGCGATCCTGAATATTCATTGTAACCAAAGCTACCTCTGGCTCCCATGAGGTCTCCTTCGAAAAACGTTCCTGTCTGTGACTGTTCTTCTTCATACACTTCCTGTGAATATGCCACCTTATAATGTCTGTAATCATGTTCATTACCTTATATTCCCCCTTCACTTTTGCTCTTCCGTCTGCCTAATGTCTTGACCCTCGACCCCCCCCTTTGGAAGCTTGGGGTCATATTCAAATCGCCTAGCACCGCTCAGGTAAACTTGAGTTCAGAGGTCATTGCAGATTAGGAGCAATATCATTGTGCTCAGGCATTCCATCGCTCCATTCGTTCACGTCGAGTGAATCATGGAGTGGATTCGGGACCAGTAGCTGTAGAACAATCAAATTGATCACGTTTAGGACGCGTAGAAGCACAATGAGCGACCCCAACAAACACAGTCCTCTTTTGGCCGTCTAGGGGCACTTGTATATTTCACATACAAAGAGACTTTTGTGTATATAGTCTATTATTATTTTGAATATTTGTATTATACAGTTATATTTTAAGACTGGAATTTGTTACAATTGACGTGTCTCCATTTGTAAAGACTGTTCGTAGTGTATAGGTTTCTCTTTTGAGCGTGTGCTGTTCGTCGTCCTGGTCCTGGAGACCAGTCGTATATGGTGACCGTTAGTGACACTGTTGTCTTGAGGTACAGAACTGGACCAAATATAAACTCATGACTCGCAGTTTACATGGTGAGAAATATGTTCGATGAGATTTTTGAACTGAGAAATGCCTTACCTTGGGGCAAAGAATGGTACGGAGACAAATTTTCAACAGGGTAAAAAGAGTAATACAGCTAGTATAAAAAAAAAAATGGACTGTTAATATGAATATGAAGTCAGCATTTTACACACACTTACATAATCCAAAGTGTTTACCATGAAGGTACATAATTTTTTTTTTTTGTTTGTTTTAAACATTGCTTTATAGTGTGCAATGATGCATAAATATAGGTCCCCGTTGTCAAGATGCATACAAGCATCTGATGCATACTAGCACTTATTTACTCTTTTCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_04750261_04754885.mRNA True 2419 mRNA 0.47 9 4750261 4756045

Neighbor

gene id symbol gene type direction distance location
CI01000013_04720501_04724747 NA coding upstream 25321 4720501 ~ 4724940 (+)
CI01000013_04673313_04707104 MEGF11 coding upstream 42791 4673216 ~ 4707470 (+)
CI01000013_04657029_04672057 MEGF11 coding upstream 77519 4656803 ~ 4672742 (+)
CI01000013_04612468_04618550 NA coding upstream 131261 4612054 ~ 4619000 (+)
CI01000013_04542059_04550082 LCTLB, LCTL coding upstream 199954 4542059 ~ 4550307 (+)
CI01000013_04760068_04760352 NA coding downstream 3962 4760007 ~ 4760374 (+)
CI01000013_04774039_04780331 VWA9 coding downstream 17994 4774039 ~ 4780762 (+)
CI01000013_04788303_04790895 PPCDC coding downstream 32258 4788303 ~ 4791025 (+)
CI01000013_04805165_04810980 NA coding downstream 48434 4804479 ~ 4810980 (+)
CI01000013_04837614_04840771 NA coding downstream 81569 4837614 ~ 4841571 (+)
G80875 NA non-coding upstream 31964 4718083 ~ 4718297 (+)
G80834 NA non-coding upstream 37732 4709807 ~ 4712529 (+)
G80826 NA non-coding upstream 172348 4577531 ~ 4577913 (+)
G80832 NA non-coding upstream 176929 4572802 ~ 4573332 (+)
G80831 NA non-coding upstream 178161 4571764 ~ 4572100 (+)
G80879 NA non-coding downstream 14265 4770310 ~ 4770538 (+)
G80842 NA non-coding downstream 60425 4816470 ~ 4818947 (+)
G80850 NA non-coding downstream 70273 4826318 ~ 4828164 (+)
G80893 NA non-coding downstream 93394 4849439 ~ 4849797 (+)
G80919 NA non-coding downstream 162938 4918983 ~ 4919289 (+)
CI01000013_04051081_04064651 NA other upstream 684432 4050837 ~ 4065829 (+)
G80062 NA other upstream 1165477 3584008 ~ 3584784 (+)
G79309 NA other upstream 2283090 2466765 ~ 2467171 (+)
G77695 NA other upstream 3797292 946521 ~ 952969 (+)
G77533 NA other upstream 4040712 708833 ~ 709549 (+)
G80845 NA other downstream 79033 4835078 ~ 4836232 (+)
CI01000013_06050285_06059640 NA other downstream 1300253 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 1322517 6075400 ~ 6081684 (+)
G81994 NA other downstream 2579900 7335945 ~ 7338239 (+)
G82168 NA other downstream 3272293 8028338 ~ 8041343 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location