CI01000013_04989803_04992613



Basic Information


Item Value
gene id CI01000013_04989803_04992613
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4989534 ~ 4992888 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000013_04989803_04992613.mRNA
CTATAAATAACATTTAGACAAATGTCATCAAGGAGATCCAATAAACATAATTCTATGTCTTTTTAAAAAAATAAATACATTTCATTAATTTAATGAAATTCTAGCTATTCAGTTACTGGAGAGGCTTTCCTTGTGTCTCAAAATTGCATAATGAAATTGAGAATTTGAAATTGGTAATGAAATGCTAATTATTATTTAGCATTATTTACAGATGTAAATATATTTTTTACATATGCTTAATACTTATAAAGGGACAATAAAATCACGTAATGTCGATTACCCATGTACAAGCCACAGAAACGCACGATCCTCCAGTCTTGTTCAACCCTCCACACATACCCAAAAACAATCCTAGTATGCACTACTACAGTACTAACAGATTGAACAGAAAAGCACAGCTGATTACAAGACACTGGAACAATGCACACATTTTGCTAGCAGTTCGGGCCGCTATGCAAGAGAAGAGCTTGAGCACCCCCTTCCATGAGTACACAGGCTGTAGTCTAACAGTAGCAGACATGGGGAGCAGATTGACTCTTCATCGTGCTCTTTCCATAAAAACAAAAGGTCCCATAAGACAGGGTCCCTCCTTTCCTGTTTCACTCTCGTTTTCCTATAATCTTATTCGAATAGCCGTGATAGACAGAAACACAGCTCCAACAGGTCACCCAGGGCCACTCACATTCCAGGACTCGTTTGAGAGAGACCACTCCCAGGACTTTCGGAGTACCCCGTCAGCTTTCCAAGTGAAGAAAACGGAGAAGCAAGAAACATGCTGTTGCACAGAGGAGCAAACTCTCAGAACGACCGCAGAAATAAGGAGAGTCCCGCCTGCACCGTCACCACTGTTGCCTGACGAGGAGGAGTGGGACCGGTTCATGGGCCCAGCCGTGTCAGATTACACAGCTCCTCCTCCTGCCGCTGCCTCTATTCATGTCGTCCAGACAAAGAGACTTTACAGCATGGCACGTCTATGACAGCCGGCAACTTAAACAAAACCCTCCACAATTACACACGCTACTCATAAACGGCACTAACAAAACCACAAATGCAGAGAAAGAAAGCTTTATGGGCACTTTAATGTATTTGAACATAGAGAGAACGTGGCACATTACAACAAATCCAATATCGCCAGTCTTAACTGCTATAAAGAAGCTCAGAGTGTAGAGCCACATCATATACCACTAAGTATCGCCTCTCACCACTACCCAAAATACCCCAGCACATGCCCACATGCTTAGAATGCAGCTGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000013_04989803_04992613.mRNA True 1252 mRNA 0.42 5 4989534 4992888

Neighbor


gene id symbol gene type direction distance location
CI01000013_04950930_04976334 LONP2 coding upstream 12824 4950930 ~ 4976710 (+)
CI01000013_04943413_04948991 IL34 coding upstream 40278 4943413 ~ 4949256 (+)
CI01000013_04916607_04940299 SF3B3, SF3B3.L coding upstream 49226 4916313 ~ 4940308 (+)
CI01000013_04869003_04877964 AARS coding upstream 111157 4868965 ~ 4878377 (+)
CI01000013_04854576_04864881 NA coding upstream 124307 4854576 ~ 4865227 (+)
CI01000013_05246618_05251189 NA coding downstream 251906 5244794 ~ 5251310 (+)
CI01000013_05262407_05267780 NA coding downstream 269241 5262129 ~ 5267965 (+)
CI01000013_05402289_05403494 NA coding downstream 408699 5401587 ~ 5403927 (+)
CI01000013_05436977_05445492 NA coding downstream 444089 5436977 ~ 5445492 (+)
CI01000013_05572116_05579830 BBS2 coding downstream 578452 5571340 ~ 5580139 (+)
G80795 NA non-coding upstream 10734 4977980 ~ 4978800 (+)
G80798 NA non-coding upstream 11847 4977249 ~ 4977687 (+)
G80919 NA non-coding upstream 70245 4918983 ~ 4919289 (+)
G80893 NA non-coding upstream 139737 4849439 ~ 4849797 (+)
G80850 NA non-coding upstream 161370 4826318 ~ 4828164 (+)
G80933 NA non-coding downstream 11486 5004374 ~ 5004897 (+)
G80942 NA non-coding downstream 35238 5028126 ~ 5028475 (+)
G80946 NA non-coding downstream 44696 5037584 ~ 5037832 (+)
G81152 NA non-coding downstream 117949 5110837 ~ 5111052 (+)
G81160 NA non-coding downstream 151497 5144385 ~ 5144584 (+)
G80845 NA other upstream 153302 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 923705 4050837 ~ 4065829 (+)
G80062 NA other upstream 1404750 3584008 ~ 3584784 (+)
G79309 NA other upstream 2522363 2466765 ~ 2467171 (+)
G77695 NA other upstream 4036565 946521 ~ 952969 (+)
CI01000013_06050285_06059640 NA other downstream 1063410 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 1085674 6075400 ~ 6081684 (+)
G81994 NA other downstream 2343057 7335945 ~ 7338239 (+)
G82168 NA other downstream 3035450 8028338 ~ 8041343 (+)
G82581 NA other downstream 4336441 9329329 ~ 9334948 (+)

Expression



Co-expression Network