CI01000013_05262407_05267780


Basic Information

Item Value
gene id CI01000013_05262407_05267780
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 5262129 ~ 5267965 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_05262407_05267780.mRNA
GTATAAAACAAGAGAAAAAACACTTATACTCCAAATACAATCTATGAATACAAGAAAATGTATCTTTGCTTTCTAGTAAAAATACTAGCTTATACCAATACCCTATTATGGGTAATATTATGTACAAAACAAGATCCAATGCATGGATGCAGATGAACTGAATGAATCCTTTTTGACAAAATGAGACAACATCTGTTCCTTGGCTAAGAACGGATCAAACAATATGTACATGCACAGAAACGAGAGGGAAGCGAGACCAAAGTGAAAAATTGGGAAAAATGAGAGAAGGAGAGTTAGAGGAAGAGAATTCTGCTAAAGAAAGCAGAAAGCAAAGGGATAATTGGGCTGTCCAACACAAAGTAATGGTAGCCAAGGGGCCTGTGAGCATGTGTGTTTCCGCACACGCTGGTGTACGGATGAGTGTGGTAAATTTCTACCAACTGTGGCTATTGACTCAGAGCTTAAGCAAGCCACTGAGATCCATAGTCGTCTATAACGTGTCGACACTGAAATTCACATTTAAACCTGAACAGCCAGATGACTTGGCCAGGGTCTTGTTAAAAGCAAAAGAGACGACGCAACACGTAGAAGACACAAATCCATATTTCAAGGTCAAAGCGAGCCATAATTCCTTTGCCAATTTCAAACTTTTATTGGAAGTGGACACACGCATGAGCTCGCCCGCGCTCGCACAGCCCCAGATTGCTAATTGCAGTATAGAGGGTAATTATGGCTCTGGACACGTCTACATCTTTGGTTGGCTGGTTGTGAATTATCTGCTCACTAAGGAAGGGGGAAAAATTCTGAGCAAATATGAGGAAGCAGCAGGATGCTAATAATGCACCTCCAGCTGTTCAAGTTAACCTGCAAATGTGTCCATCTGTACCTCCAGAGTAAGAGGGAGACAGAGAGAGAGAAAGATGAAATGCTAGAGAGGACAGAGAGGGAGGGAGTTATACAAATGAAAAGAGATTGAAAGGATAAATGCACTCACATGAAAAAAACAATGATGGAGGTGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_05262407_05267780.mRNA True 1021 mRNA 0.41 4 5262129 5267965

Neighbor

gene id symbol gene type direction distance location
CI01000013_05246618_05251189 NA coding upstream 10819 5244794 ~ 5251310 (+)
CI01000013_04989803_04992613 NA coding upstream 269241 4989534 ~ 4992888 (+)
CI01000013_04950930_04976334 LONP2 coding upstream 285419 4950930 ~ 4976710 (+)
CI01000013_04943413_04948991 IL34 coding upstream 312873 4943413 ~ 4949256 (+)
CI01000013_04916607_04940299 SF3B3, SF3B3.L coding upstream 321821 4916313 ~ 4940308 (+)
CI01000013_05402289_05403494 NA coding downstream 133622 5401587 ~ 5403927 (+)
CI01000013_05436977_05445492 NA coding downstream 169012 5436977 ~ 5445492 (+)
CI01000013_05572116_05579830 BBS2 coding downstream 303375 5571340 ~ 5580139 (+)
CI01000013_05583328_05584677 B3GNT9 coding downstream 315363 5583328 ~ 5584704 (+)
CI01000013_05607381_05608529 FOXL1 coding downstream 338918 5606883 ~ 5608570 (+)
G81186 NA non-coding upstream 30712 5203982 ~ 5231417 (+)
G81187 NA non-coding upstream 67442 5194269 ~ 5194687 (+)
G81184 NA non-coding upstream 69552 5192370 ~ 5192577 (+)
G81175 NA non-coding upstream 84071 5177759 ~ 5178058 (+)
G81172 NA non-coding upstream 88325 5173521 ~ 5173804 (+)
G81250 NA non-coding downstream 11608 5279573 ~ 5279938 (+)
G81380 NA non-coding downstream 223093 5491058 ~ 5538944 (+)
G81306 NA non-coding downstream 245327 5513292 ~ 5578648 (+)
G81404 NA non-coding downstream 346939 5614904 ~ 5615250 (+)
G81408 NA non-coding downstream 349861 5617826 ~ 5618111 (+)
G80845 NA other upstream 425897 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 1196300 4050837 ~ 4065829 (+)
G80062 NA other upstream 1677345 3584008 ~ 3584784 (+)
G79309 NA other upstream 2794958 2466765 ~ 2467171 (+)
G77695 NA other upstream 4309160 946521 ~ 952969 (+)
CI01000013_06050285_06059640 NA other downstream 788333 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA other downstream 810597 6075400 ~ 6081684 (+)
G81994 NA other downstream 2067980 7335945 ~ 7338239 (+)
G82168 NA other downstream 2760373 8028338 ~ 8041343 (+)
G82581 NA other downstream 4061364 9329329 ~ 9334948 (+)

Expression


Co-expression Network