G265405


Basic Information

Item Value
gene id G265405
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019171900.1
NCBI id APWO02001498.1
chromosome length 225111
location 157012 ~ 159177 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU363439
TTTTTGAATGCACTGTAgtataatgttgctttaaatgaGGGCATAAATATAGACAGATACAATATTCTCAGTCAGAACAAACAACAAAAGACAACCAGAATTTGATAtttgtttctcttattttgtttttgttaataacACTACATACATTTATAAGACCACCATTGATTATAATTTAAccattttgtgaaaaaaaaaaagaaacataagtCCAAACCCCTATCAAAGCAGTTTCTGGTTACtgtacaattgttttttttaatgattatctAGACAACTCCCTATCAAGCATTAGTTCTGCAACAGTAAATGGAAAAGTAGACTACATTGCAACACcctatttacagtaaattatttatatatatatttatatcacaCTGGCTGTATTTAGAGCAGATCAATTCATGAACAAAATTAGTGCAAGGCATGGAGTAAGAAACACCTGGGTGTGTTaaaactaaagagagagagagagagagagagagagagagagaaagaaagagagaaacaaagagagagagagatagattagCATCAGGCTTGTGTTTGAGGAAGGGAGGATGGAAGAATAAAGGACGATTTATCAGGTGTGTGGAGAAGTGTGTACCCAGTCAAAGTGTGTGAAGGGTTTTAATACAGGACTGCAGTGTTACAGAGTCGAGCCCTGTAAATCCTCGAACATGCTGACCGACACGCTCAGACTGTGCCAAAATAACTGTGCTGATAAACCAGTAAAGCCTTAACACGACTGGCCAGAGAACTGcttgtatatatgtttgtgcTCACATAtataggtgcatctcaaaaaatgttgagtatcattgaaaagttactttatttcagtaattcagatcaaaatgtgaaactcatatattatatagatgtgttacacacagagtgttctattttaagtgtttatttcttatttcagttggtgcttttggcaatgtaggcagtgtgccaagtcctgctggaaaaggaaatctgcatctccaaaaaaaaagttgtcagtagcagagggaagcatgaagtgctgtaagattttgcgggaaaacaaaactgcactgactttagactttataataaaacacagtggatcaacaccagcagatgatcagcatgtctctccaaaccatcactgatcatcagtaaattttacattttatttgtaaatcaagggagcagagtctggaggaagagtggagagacacacagtctacTTTATGCTACCCCCTGctctggatttcatttttcagcaggacactgccaaaagtaccacttGGTCTTGTAGTATATCCAAAttatctgagacactgatttttgggttttcattggctgtaagcttcataatcatcaacaataaaagaaataaacacttaaaat
>TU363440
TTTTTGAATGCACTGTAgtataatgttgctttaaatgaGGGCATAAATATAGACAGATACAATATTCTCAGTCAGAACAAACAACAAAAGACAACCAGAATTTGATAtttgtttctcttattttgtttttgttaataacACTACATACATTTATAAGACCACCATTGATTATAATTTAAccattttgtgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaacataagtCCAAACCCCTATCAAAGCAGTTTCTGGTTACtgtacaattgtttttttttttaatgattatctAGACAACTCCCTATCAAGCATTAGTTCTGCAACAGTAAATGGAAAAGTAGACTACATTGCAACACcctatttacagtaaattatttatatatatatttatatcacaCTGGCTGTATTTAGAGCAGATCAATTCATGAACAAAATTAGTGCAAGGCATGGAGTAAGAAACACCTGGGTGTGTTaaaactaaagagagagagagagagagagagagagagagagaaagaaagagagaaacaaagagagagagagatagattagCATCAGGCTTGTGTTTGAGGAAGGGAGGATGGAAGAATAAAGGACGATTTATCAGGTGTGTGGAGAAGTGTGTACCCAGTCAAAGTGTGTGAAGGGTTTTAATACAGGACTGCAGTGTTACAGAGTCGAGCCCTGTAAATCCTCGAACATGCTGACCGACACGCTCAGACTGTGCCAAAATAACTGTGCTGATAAACCAGTAAAGCCTTAACACGACTGGCCAGAGAACTGcttgtatatatgtttgtgcTCACATAtataggtgcatctcaaaaaatgttgagtatcattgaaaagttactttatttcagtaattcagatcaaaatgtgaaactcatatattatatagatgtgttacacacagagtgttctattttaagtgtttatttcttatttcagttggtgcttttggcaatgtaggcagtgtgccaagtcctgctggaaaaggaaatctgcatctccaaaaaaaaagttgtcagtagcagagggaagcatgaagtgctgtaagattttgcgggaaaacaaaactgcactgactttagactttataataaaacacagtggatcaacaccagcagatgatcagcatgtctctccaaaccatcactgatcatcagtaaattttacattttatttgtaaatcaagggagcagagtctggaggaagagtggagagacacacagtctacTTTATGCTACCCCCTGctctggatttcatttttcagcaggacactgccaaaagtaccacttGGTCTTGTAGTATATCCAAAttatctgagacactgatttttgggttttcattggctgtaagcttcataatcatcaacaataaaagaaataaacacttaaaat
>TU363441
TTTTTGAATGCACTGTAgtataatgttgctttaaatgaGGGCATAAATATAGACAGATACAATATTCTCAGTCAGAACAAACAACAAAAGACAACCAGAATTTGATAtttgtttctcttattttgtttttgttaataacACTACATACATTTATAAGACCACCATTGATTATAATTTAAccattttgtgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaacataagtCCAAACCCCTATCAAAGCAGTTTCTGGTTACtgtacaattgttttttttttttaatgattatctAGACAACTCCCTATCAAGCATTAGTTCTGCAACAGTAAATGGAAAAGTAGACTACATTGCAACACcctatttacagtaaattatttatatatatatttatatcacaCTGGCTGTATTTAGAGCAGATCAATTCATGAACAAAATTAGTGCAAGGCATGGAGTAAGAAACACCTGGGTGTGTTaaaactaaagagagagagagagagagagagagagagagagaaagaaagagagaaacaaagagagagagagatagattagCATCAGGCTTGTGTTTGAGGAAGGGAGGATGGAAGAATAAAGGACGATTTATCAGGTGTGTGGAGAAGTGTGTACCCAGTCAAAGTGTGTGAAGGGTTTTAATACAGGACTGCAGTGTTACAGAGTCGAGCCCTGTAAATCCTCGAACATGCTGACCGACACGCTCAGACTGTGCCAAAATAACTGTGCTGATAAACCAGTAAAGCCTTAACACGACTGGCCAGAGAACTGcttgtatatatgtttgtgcTCACATAtataggtgcatctcaaaaaatgttgagtatcattgaaaagttactttatttcagtaattcagatcaaaatgtgaaactcatatattatatagatgtgttacacacagagtgttctattttaagtgtttatttcttatttcagttggtgcttttggcaatgtaggcagtgtgccaagtcctgctggaaaaggaaatctgcatctccaaaaaaaaagttgtcagtagcagagggaagcatgaagtgctgtaagattttgcgggaaaacaaaactgcactgactttagactttataataaaacacagtggatcaacaccagcagatgatcagcatgtctctccaaaccatcactgatcatcagtaaattttacattttatttgtaaatcaagggagcagagtctggaggaagagtggagagacacacagtctacTTTATGCTACCCCCTGctctggatttcatttttcagcaggacactgccaaaagtaccacttGGTCTTGTAGTATATCCAAAttatctgagacactgatttttgggttttcattggctgtaagcttcataatcatcaacaataaaagaaataaacacttaaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU363439 False 1383 lncRNA 0.36 2 157012 159177
TU363440 False 1413 lncRNA 0.35 2 157012 159177
TU363441 True 1414 lncRNA 0.35 2 157012 159177

Neighbor

gene id symbol gene type direction distance location
trnay-gua_12 NA coding upstream 25786 184963 ~ 185049 (-)
trnay-gua_13 NA coding upstream 26443 185620 ~ 185706 (-)
trnay-gua_14 NA coding upstream 27100 186277 ~ 186363 (-)
trnay-gua_15 NA coding upstream 27757 186934 ~ 187020 (-)
trnay-gua_16 NA coding upstream 28414 187591 ~ 187677 (-)

Expression


Co-expression Network