trnay-gua_54


Basic Information

Item Value
gene id trnay-gua_54
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019171900.1
NCBI id APWO02001498.1
chromosome length 225111
location 212556 ~ 212642 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnay-gua_54
CCTTCGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGATCCTTaggtcgctggttcaaatccggCTCGAAGga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnay-gua_54 True 73 tRNA 0.53 2 212556 212642

Neighbor

gene id symbol gene type direction distance location
trnay-gua_53 NA coding downstream 571 211899 ~ 211985 (-)
trnay-gua_52 NA coding downstream 1228 211242 ~ 211328 (-)
trnay-gua_51 NA coding downstream 1885 210585 ~ 210671 (-)
trnay-gua_50 NA coding downstream 2542 209928 ~ 210014 (-)
trnay-gua_49 NA coding downstream 3200 209270 ~ 209356 (-)
G265405 NA non-coding downstream 53379 157012 ~ 159177 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnay-gua-287 NA coding NC_048585.1 CM023239.2 59859016 ~ 59859102 (+)
eurasian perch (Perca fluviatilis) trnay-gua_60 NA coding NC_053134.1 CM020931.1 10195784 ~ 10195870 (-)
striped catfish (Pangasianodon hypophthalmus) trnay-gua_20 NA coding NC_047623.1 CM018569.1 11822377 ~ 11822464 (-)
tiger barb (Puntius tetrazona) trnac-gca_14 NA coding NC_056709.1 CM032078.1 1109604 ~ 1109675 (-)
mexican tetra (Astyanax mexicanus) trnay-gua_20 NA coding NW_019171900.1 APWO02001498.1 190219 ~ 190305 (-)