XLOC_000771 (CABZ01059403.1)


Basic Information

Item Value
gene id XLOC_000771
gene name CABZ01059403.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 56502706 ~ 56529192 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001260
TTTTCAATAGCATGAAAGAGTCTTATACAGTTTCTCTTGTTAATGATTCAGGTAGACACTGAAGGATGGAAATATCCAGCAGAAAGGCAGCAGAATATAAagGTAATAAACCTGATGTGAGGATTGTGCTGCTGGGAGTCTGTGGAGCTGGAAAGAGTTCAATGGGAAACGCAATACTGGATGAAGATGTGTTTAAAGAGGGCAGAACGAGAGAGAGTGAGGTGCAGAGAGGAAGAGTAGAAGGCAGAAACATCTCCATCATCGACACTCCAGGATTCTTCAACACTCACCTGACTGATGAAGAGCTGCAGAAGGAGATGATGAAGAGCCTGGATCTCTGTTCTCCTGGACCTCATGTGTTCCTGCTCATCATCAACCTGGAGAACTTCACAGACGACCACAGGAACATTGTGCAGGAAATCCTGGAGAGCTTTGGAGAAAAAGCATTGAAGTTCACAATGGTGCTGTTCATTGGAAAGGAAAAGTTCTCCAGAAGAGAATGGACTCGAATTATTACAAGTGAAAAAGCGCAGAAAATACTGAGCAACTTTAAAGGGAGATTTCATGAGATGAACAGCAAAGCTGAATGTGATTTAAAACACGTCGCAAAACTTTTTAAGAGCATTGATGAAATGGTGAAGATGAACAGAGGACAACACTACAGCAGTGAGATCAAACCGATTAGCCAAAGACAAGAGAAGAACGAGAGAGTAACACAAGGAGAGCCAAAAAGGCTGGAAGCTCAAATAAATATTGACAAGGACATTAAAACTAAAACCAAAGTGGAGAGAATGACTGGTTGCAAGCAGAGTGAAGATCCAGGTAAGCTTTTTTATGTGcagtatacatattttaaatgtaaatatttttgtaagAATAAATTGCCAATGGTTAGTCAAGCATAA
>TCONS_00001261
GTTTGCCAAATAGGTGTGTCTTTACCGTGTCTTGAAAACTGCCATAGTCTCAGGCAGTTTGGAGTCTGGTAAACTTTTCCCCAAAAGGGCTGAAAATGAGGTTGTAATAATTATAAAGGgactttaatcatttttttttttcaccgaCTGAAATAAGGGACAGAAATACAATCATAATGGCATCAGCATATGAAGGTAATAAACCTGATGTGAGGATTGTGCTGCTGGGAGTCTGTGGAGCTGGAAAGAGTTCAATGGGAAACGCAATACTGGATGAAGATGTGTTTAAAGAGGGCAGAACGAGAGAGAGTGAGGTGCAGAGAGGAAGAGTAGAAGGCAGAAACATCTCCATCATCGACACTCCAGGATTCTTCAACACTCACCTGACTGATGAAGAGCTGCAGAAGGAGATGATGAAGAGCCTGGATCTCTGTTCTCCTGGACCTCATGTGTTCCTGCTCATCATCAACCTGGAGAACTTCACAGACGACCACAGGAACATTGTGCAGGAAATCCTGGAGAGCTTTGGAGAAAAAGCATTGAAGTTCACAATGGTGCTGTTCATTGGAAAGGAAAAGTTCTCCAGAAGAGAATGGACTCGAATTATTACAAGTGAAAAAGCGCAGAAAATACTGAGCAACTTTAAAGGGAGATTTCATGAGATGAACAGCAAAGCTGAATGTGATTTAAAACACGTCGCAAAACTTTTTAAGAGCATTGATGAAATGGTGAAGATGAACAGAGGACAACACTACAGCAGTGAGATCAAACCGATTAGCCAAAGACAAGAGAAGAACGAGAGAGTAACACAAGGAGAGCCAAAAAGGCTGGAAGCTCAAATAAATATTGACAAGGACATTAAAACTAAAACCAAAGTGGAGAGAATGACTGGTTGCAAGCAGAGTGAAGATCCAGGTAAGCTTTTTTATGTGcagtatacatattttaaatgtaaatatttttgtaagAATAAATTGCCAATGGTTAGTCAAGCATAA
>TCONS_00001262
GTTTGCCAAATAGGTGTGTCTTTACCGTGTCTTGAAAACTGCCATAGTCTCAGGCAGTTTGGAGTCTGGTAAACTTTTCCCCAAAAGGGCTGAAAATGAGGTTGTAATAATTATAAAGGgactttaatcatttttttttttcaccgaCTGAAATAAGGGACAGAAATACAATCATAATGGCATCAGCATATGAAGAGAATTTGAGGATTGTTCTTCTTGGTAAAACCGGATCAGGAAAGAGCTCAACAGGAAACACTATTTTGGGAAGAGATGCCTTCAGAGTCAGTTTTCTCTCATCCACTCAAACATGTGAGAGAAGAAATGCGGTGATTTCAGGAAGAAACATCTCAGTAATCGACACCCCTGGACTGTTAAACGTCAGGTGGTACAAGCATTTACAGAACAAACTCAAGCAGGATATAGAGAAATACCTGGAGAAGTGTGCTCCGGGTCCGAACGTGTTTCTGCTGGTCATGAGGCCCAATGGCAGACACACAGATGAAGACGCAAACACTGTCAAGTGGATTCAGGAGAACTTTGGAGAAGAAGCTGTTCGTTATACCATGGTTCTGTTCACTCATGTTGATTTGCTGACGGATGAATCTATGGATGATTATATTAGACAAAGTCTGGATCTAAAGTTACTGATTGACAGCTGTGGTGGAAAATTTCACACGGTGAACAATCAGGATAGAAACAATCCGAATCAGGTCACTGAGCTGCTGGAGAAGATTGAACAACTGGAGAGAGAATTTATGATGGTGCTACTTTCAAGATGAGTGATGACTTCCTGTCTAATCCCGCCCCCTTTTAGGGCGGGACCTCCTATCTAAGCCACGCccttttatatgcattttttaaaacatgtttttacgATGATTTGATTCTTAtcaatttattctttcatttattttcgttCAGCTtagtcggtcctggaggtcctggtgttctgcagattttagctccaacttgcctcaacacacctgcaaggatgtttctagaaagcctaataaaagcttgattagctagcccaggcgggattggggttggaactaaactttgcaggacaccggccctccaggaccgagtttggacatgcctagcttagtccctttattcatcagagatcaccacagtggattgaaccaccaactattccagcatatgttttacacagcgcatgcccttccagctgcaacccagtatgggAAACACtgatacacgctcattcacacacacactcatacactacggacaatttaattaatccagttcccctatagcgcatgtgtttggactgtgggggaaaccggagcaccctgagcaaacccacaccaacacggagaggacatgcaaactccacacagaaatgccaactgacccagccgggactcgaaccagcgaccttcttacggtgatgaggccacagtgctgaccactgagccacacctgattaaacatttcaaaataaataaataaatgaaagaaaaaaagatgaataCCTTGATTTTTGATATCTGCGTCCTTCCTGCAGGAGGGGATTTTTACAgcttttattgatttaaatgggtgtattttcagtgtgaacactaGATGGCGCTACGCTAGATGACATGTGCTGGAGTTTTGTAAATTCGTCTCCGTTTGATGTTTAAGGCAGTTTAATATGCAGAATGCCTACAGTGATTTGAAAGCacaataatatttaagttaaatccTCATTTgggcattttttattttcattaatatttcttttttaatgaaatgagtggaaaaaaaatgtgtgggaaaaaaaaaacaaaattgagTGATTTTTGAAAGTGTTTGCGTTCCCTCGTAAAACTATTCGACAAACACTTCACTACATACATaacaaccctcctgtttttgccgGGATTCTCCAGGAATAAAAATATGAGAAAATATGGAAAATACCTAATAATAGAacaatggtaaaatacgggagaatgccggcaaaaaaaaatgcttacctatcactcgtttttttttttccacccatttttttctccaccatcacgtcccttcactacggagacccggaagggacgtgatggtggggaaaaaaatgGTGGAAGAAACAAAAACTGGATGGAAAAAAAAGAGTGAtaggaaaacatattttaaagtttttttgtgttccctcgcaaaaatgtttctccacaaacacttcctgttcacttcattcatATAAATGTAGGGCAGGGTTTGTTTTGTCCACAAGATGTCGCTATGACACTGTTTTCTGATGTTCTTTTGTGTTGTTTGAGCCTCTTGGCATATCATAGTGCACCATATTTTCCTCAGTTTGTGTTATCAACAATGATAGGTAAGACGTGTTCATGATAGTAGGACCTTTATCTAAAATACATCTTTGTTGTCAATGATCAAAAGTTCTGTTTACTGAGATATTCTGTGTACTAAATTGTTAAAGAGCAAATGCGGTGGTGCTAGAGATTCCCCTATAGCatgtttttgccgaaattctcctgtactttaccattctatcccactatcatcctatcattaagtatCTTCCCATATTTCTGATATATTTTTAGTCTTGAAAGCACGCTGACATCAAAATTAAAATCACTTTCTTCACATTAAAGCTGTGCATCAATCGTCacctttcatatgcaacctctgatccagtgaatgcatgtataagcgctgactgacagatgaGCTTCGTACAATATTATCctagatcagcttctgtacacgccatttacagaggagcaaaAGGGCAGGACACTTTGGGATTCgggtgcatgtttaaacagacaaatacactgaataatatgtaaacgtcttcgtcctgcatgttttatttaaaacagcaaattttCTCTTAAATAAGCACCTCTGTTatctaatgaaaataaaaaaaatacatataaacaacaAAAAGTCAATATTTAGATGCATGCAAGAACTTCAAGAAAGAAAGATGACATTTTTAAGAATTGTGAAATGTTAGTCCGGTGGTTTGTAAACTGTGTACATGTGATGAGGCTTTTAAATCTGACACAGAGAGACTTCAGAATCGTTGTAAAACCCAAATCCTGCATAGAGGGGTTCAGTGAATGTAGTGTTGaacgtgtatatgtgtgtgagtgtgtgtgcgtcagagatgctgtaaaaggacagACGACCTGACGACACATCTAGATAGACCCCTACTCTATTGGATAAAGAGGAAGAGGGAGGAATAGGTGTGCTGTTAGCCTTCCCATCATGCCACGCAGAGAAAATCGTATCGCAAAAGTACAGATTCCAGGACTTATTATTAAGACCGAAGCGACAGTCAATTCCTCCTTTCCTCTGGATCCCTTTATATGCCACCGCTGCGTGACCCCAGCCTGTCAACTTagcctcccagtaacagcgtccagtcAGAGTCTCTGCACTCAGAATCTGCTCATAGTtctcaaatctgtctggatgatcaggatacggctgatgaTCTCTCACATGCGTTCCCCTTCTGTTGTCCTCAGACACAATCACgcgagtgtgtgctgtgtttggatccagtgaGAGACTACAGGCATCTGCACACAAGGAGAGAGAATACAGCTATAACTGTACAGGACTATTCGCTGGGCTTTAGATGAGGGAGATATAAATAGCGCTGGAAGTGCTTCCAGGACAGGTTTAAAAACTGCCAAAtaactcattaaaataattaaatatgcaaagatatgtatatttgtgtgtgtttgtagacaTACATTTTCGCATTCCATGTGTGATCCTGAAATGCCCTCCATGATCTACACTGGacagacaaaaacaacaaaacattagagGAAATTAATGACtttaatcatttataaataatcattgatacatacatatattacaccaacttatccagcatatgttttacgcagcaaatgccctcacagctgcaacccatcactgggaagcatccacactctcatacacactcattcacacacacgctgtggttaatttagccttcccaattcacctatagcgcaggtCGTTggacttggaggaaacccaccaacacagggagaacatgcaaactccacacagaaacgccagctgaggctcaaaccagagacctttttgctgtgag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000088906

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001260 False 905 mRNA 0.40 2 56502706 56523047
TCONS_00001261 False 998 mRNA 0.40 2 56520836 56523047
TCONS_00001262 True 4129 mRNA 0.40 2 56520836 56529192

Neighbor

gene id symbol gene type direction distance location
XLOC_000770 zgc:171452 coding upstream 34105 56463494 ~ 56468601 (+)
XLOC_000769 CABZ01059392.1 coding upstream 44669 56447107 ~ 56458037 (+)
XLOC_000767 c3a.3 coding upstream 182137 56274613 ~ 56320569 (+)
XLOC_000766 c3a.2 coding upstream 235975 56229674 ~ 56266731 (+)
XLOC_000765 crb3b coding upstream 317778 56180416 ~ 56184928 (+)
XLOC_000772 NA coding downstream 32034 56561226 ~ 56604352 (+)
XLOC_000773 NA coding downstream 33635 56562827 ~ 56564352 (+)
XLOC_000774 NA coding downstream 40322 56569514 ~ 56603810 (+)
XLOC_000775 NA coding downstream 131005 56660197 ~ 56662651 (+)
XLOC_000776 NA coding downstream 139966 56669158 ~ 56683634 (+)
XLOC_000760 NA non-coding upstream 773580 55714918 ~ 55729126 (+)
XLOC_000761 NA non-coding upstream 781291 55717578 ~ 55721415 (+)
XLOC_000758 NA non-coding upstream 823259 55678912 ~ 55679447 (+)
XLOC_000748 NA non-coding upstream 1063431 55437572 ~ 55439275 (+)
XLOC_000747 NA non-coding upstream 1109674 55392380 ~ 55393032 (+)

Expression


Co-expression Network