LOC111189404 (LOC108413903,LOC108416019,LOC106564892)


Basic Information

Item Value
gene id LOC111189404
gene name LOC108413903,LOC108416019,LOC106564892
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019171985.1
NCBI id APWO02001583.1
chromosome length 114847
location 33255 ~ 38798 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU366203
TGTTGAAGAGACAGATGGTGGAACAGAGATTGGGACGCCTCTTGGAGAAAGACAAGCGGATTTTGCAGGAGCTGAAGAGTCTGCACTGTGACCCTCATCCATACTGCACAGTTCTACCTTCAGAATCTGATTTCAgtTTCTGGAAGATTCTGATGCAGGGTCCTCCTGAAACACCGTATGAGAAAGGAGTTTTTGAGCTGTATTGTGAGTTTGAGACAGAATACCCTGTGAAGCCACCACTGATGAAATTCCTCACACCCATTTATCACTGCAACGTGAACAGTGTGGGAAGAATCTGTCACAACATATTTGATCGTAATTACTCCGCCCAGATCACCATGCGGCAGATTCTGGATGCTGTTTATGGACTCCTAATTGTTCCTGAGCCAGAAGATCCTTTAGACAGtgttctTGCAG
>XM_022663112.1
ATGTTGAAGAGACAGATGGTGGAACAGAGATTGGGACGCCTCTTGGAGAAAGACAAGCGGATTTTGCAGGAGCTGAAGAGTCTGCACTGTGACCCTCATCCATACTGCACAGTTCTACCTTCAGAATCTGATTTCAgtTTCTGGAAGATTCTGATGCAGGGTCCTCCTGAAACACCGTATGAGAAAGGAGTTTTTGAGCTGTATTGTGAGTTTGAGACAGAATACCCTGTGAAGCCACCACTGATGAAATTCCTCACACCCATTTATCACTGCAACGTGAACAGTGTGGGAAGAATCTGTCACAACATATTTGATCGTAATTACTCCGCCCAGATCACCATGCGGCAGATTCTGGATGCTGTTTATGGACTCCTAATTGTTCCTGAGCCAGAAGATCCTTTAGACAGtgttctTGCAGAAGAATTCCTACTCAACAAGGACAAGTATGATGAAGAAGctcaaagaaacacagaaagcaATGCAAATCAGTCCATAGATGAAACAGAAAAGGCATaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC108413903 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU366203 False 417 TUCP 0.46 4 33256 38606
XM_022663112.1 True 516 mRNA 0.44 5 33255 38798

Neighbor

gene id symbol gene type direction distance location
G267476 NA non-coding downstream 36 38834 ~ 40979 (+)
G267478 NA non-coding downstream 5471 44269 ~ 45041 (+)
G267479 NA non-coding downstream 9322 48120 ~ 48535 (+)
G267485 NA non-coding downstream 36321 75119 ~ 75882 (+)
LOC103023347 NA other downstream 21177 59975 ~ 95463 (+)
trnad-guc_30 NA other downstream 58671 97469 ~ 97540 (+)
trnav-uac_5 NA other downstream 59014 97812 ~ 97884 (+)
trnai-aau_15 NA other downstream 59340 98138 ~ 98211 (+)
trnad-guc_31 NA other downstream 59915 98713 ~ 98784 (+)

Expression


Co-expression Network