trnad-guc_30


Basic Information

Item Value
gene id trnad-guc_30
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019171985.1
NCBI id APWO02001583.1
chromosome length 114847
location 97469 ~ 97540 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnad-guc_30
TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTCCCCGACGGGGAg

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
trnad-guc_30 True 72 tRNA 0.60 1 97469 97540

Neighbor

gene id symbol gene type direction distance location
G267485 NA non-coding upstream 21587 75119 ~ 75882 (+)
G267474 NA non-coding upstream 25481 30266 ~ 71988 (+)
LOC103023347 NA other upstream 2006 59975 ~ 95463 (+)
LOC111189404 LOC108413903,LOC108416019,LOC106564892 other upstream 58671 33255 ~ 38798 (+)
trnav-uac_5 NA other downstream 272 97812 ~ 97884 (+)
trnai-aau_15 NA other downstream 598 98138 ~ 98211 (+)
trnad-guc_31 NA other downstream 1173 98713 ~ 98784 (+)
trnav-uac_6 NA other downstream 1516 99056 ~ 99128 (+)
trnai-aau_16 NA other downstream 1842 99382 ~ 99455 (+)

Expression


Co-expression Network