CI01000013_07765924_07780475


Basic Information

Item Value
gene id CI01000013_07765924_07780475
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 7764685 ~ 7780716 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_07765924_07780475.mRNA
GTATAAAAATTAGTTTTATTCCATTTAATTCCAACATTTGTGCTGTTTTCGAACTTAAGAAAGCCCCCTTGTGTAAGTTACACCCTCAACAAACAGAATTTTTCAATAATAGTATCAGAGTACTCAATAATGTCTAAAGTGGAAAACATCCCAACTGAATATTCAGAAGTGTTTATCTCATGGACTACTTTCTATCCCATGAGGTCACAGGAGCTGAGCCAAATAGAATTGAAGTAGCAACAAAAAATTGAGTCATTTTTTCCTAATGGATGGCAAAATTGTACAATTGAGATAAAACTTACGTCTCAGACCAAAAGCAAACCATAAAATCCAATCCCTTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTGTCATTAATTACTCACCCTCATGTCGTTCCACACCCGTAAGACCTTCGTTCATGTTCAGAACACAAATTAAGATATTTTTGATAAAATCCGATGGCTCAATGAGGCATCCATTGGCGGCAAGATAATTAACACTTTCAAATGCCCAGAAAGTTACTAAAGATATATTTAAAACCATTCATGTGACTACAGTGGTTCAACCTTAATGTTATGAAGCGACGATAATACTTTTTGTGCACGAAAAAAACAAAATAACTTTATTCAACAATATCTAGTGATGGACGATTTCGAAACACTACTTCATGAAGCTTCGAAGCTTTACGAATCTTTTGTTTCGAATCAGTGGTTTGGAGCATGTATCAAACTGCCAAAGCCATGTGAACCATTGAAATTTCGAAATGTTTCGAAACACTTATGACGTAACAAAGCCTCGTTTACTGATATCACGTGACTTTGCCTGTTTGATACACGCTCCGAAACAATGGTTTGGAACAAAAGATTCATAAAGCTTCAAAGCTTCATGAAGCAGCGTTTTGAAATCGCCCATCACTAGATATTGTTGGATAAAGTCGTTATTTTGGTTTTTTGGCGAAGAAAAAGTATTATCGTCGCTTCATAACATTAAGGTTGAAGGTTGTCACATGAACTGTTTTAAATATGTCTTTAGTAGCTTTCTTGTCATTTGAAAGTGTTAATTATCTTGTTGTCAATGCAGGCCTCACTGATCCATCGGATTTTAGCAAAAATATCTTAATTTGTGTTCTGAAGATGAACGAAGGTCTTACGGGTGTGGAACGACATGAGGGTGAGTAATTAATGACAGAATTTTCATTTTTGGGTGAACTAACCCTTTAAGACTAAACCTAACCATGACTGGAACAGGAAAGTACACTAAAAGCTGTCTCTTCCGTGTAGACACCCACACAATGGAGGAAGGGGAGGTATCAAAAGAAAATGACATGCAGGCTGGCACCGGCTCTGTGAGGAAATGTCATTGCAGGCTTGGGGTCTCTAGATGCTTTCAGCTGCGCAAGTGCAAACACCAGGTTAAGCCGGTACACTGGGACTACGAGAACTCTGTGGAAGAGTTTGGGGTCAATTCAATTTCTCAAAATGTTAAACTGCGCTGTGCCATGAATGCTATAACTGTATCAGCCAAAAAGACCAACAATGAAAACCTGAAAAATGGTATCACTGTGTGTTTAGATGCAGTTGCGTTTCATTTAAGCAACATAAGACAGAGATTTATAGAGAGTCTCTCTGGATTAGCTGCACCGTCCTTGGCTTCTCTGTTCATGCTGTTAAGGGCTCAAACCGTTCAGTTTGCAGAGAGTGAAGCTCTCATTACCATGGGAAGTTATAAGGATCCTGTCATCTGCCTGAAGCCTTCTTATTTTTTTCCAACTGCAGCCTCTTACCTCACTTCCTTTTATAGCTGCGAGCTTTCGTTCAATCTGGCACCTCATGGCAATAACTCAGTTAATCTATCACACCAACCCACACCACCAAACCTCTCTGTAATCCAGCACTGGTTAATTCCATCAGTCTCAAGTCTACTATTCACCCCCATCAGCCCTGAAATCCATTTTAAAGAGTTGGATAGTACTTTGCAGTTCTTTTATCCTCAGCTGGTGAGACTGGATGGCTGTGAGGTACGAGGCCAAGACAAAGATAAATTTGCAGCCAAAAAGCAAAGGGAATAATTACGCTGAATACCTCTAAATCATAGTCAGGACTGTAGCCGCTGCTGTGCTGGGCAGAAGTCAGCGTAATGAAACCAGGCAAGATACAGATGATCCTCAGCTCTATTAGGAGTCCAAGAGGGTACTAAAGAATGTGGAAATTATTGATACTTTAAAGAATTGTAATTGCCTTTCATCACTTTATGAAATCAATACACTGCCACTGACTAATCAATCAAGACTAATAGGTTGATTTTTATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_07765924_07780475.mRNA True 2314 mRNA 0.39 5 7764685 7780716

Neighbor

gene id symbol gene type direction distance location
CI01000013_07375912_07390782 MLYCD coding upstream 373682 7373818 ~ 7391003 (+)
CI01000013_07286519_07288160 NA coding upstream 476138 7286442 ~ 7288547 (+)
CI01000013_07277014_07279249 NA coding upstream 485366 7276610 ~ 7279319 (+)
CI01000013_07154745_07159568 PECR coding upstream 605077 7154745 ~ 7159608 (+)
CI01000013_07148102_07150807 PDF coding upstream 613730 7148052 ~ 7150955 (+)
CI01000013_07791141_07802608 NA coding downstream 9988 7790704 ~ 7802710 (+)
CI01000013_07929832_07935997 GAN coding downstream 149116 7929832 ~ 7935997 (+)
CI01000013_07970614_07989626 CMIP coding downstream 189898 7970614 ~ 7989756 (+)
CI01000013_08013515_08013676 NA coding downstream 232799 8013515 ~ 8014766 (+)
CI01000013_08066408_08071727 KLHL36 coding downstream 284493 8065209 ~ 8071972 (+)
G82076 NA non-coding upstream 299777 7463581 ~ 7464908 (+)
G82073 NA non-coding upstream 316121 7448288 ~ 7448564 (+)
G82069 NA non-coding upstream 322681 7441787 ~ 7442004 (+)
G82065 NA non-coding upstream 336666 7427817 ~ 7428019 (+)
G82061 NA non-coding upstream 355447 7408969 ~ 7409238 (+)
G82286 NA non-coding downstream 40984 7821700 ~ 7822011 (+)
G82337 NA non-coding downstream 171135 7951851 ~ 7952268 (+)
G82338 NA non-coding downstream 171725 7952441 ~ 7952655 (+)
G82339 NA non-coding downstream 172052 7952768 ~ 7952996 (+)
G82146 NA non-coding downstream 230545 8011261 ~ 8059825 (+)
G81994 NA other upstream 426446 7335945 ~ 7338239 (+)
CI01000013_06076169_06080164 NA other upstream 1682318 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA other upstream 1705189 6049864 ~ 6060269 (+)
G80845 NA other upstream 2928453 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 3698856 4050837 ~ 4065829 (+)
G82168 NA other downstream 247622 8028338 ~ 8041343 (+)
G82581 NA other downstream 1548613 9329329 ~ 9334948 (+)
G84005 NA other downstream 1820895 9601611 ~ 9602235 (+)
G84194 NA other downstream 2249892 10030608 ~ 10036953 (+)
G84215 NA other downstream 2295738 10076454 ~ 10079336 (+)

Expression


Co-expression Network