CI01000013_08216673_08226743 (PARP12A, PARP12)


Basic Information

Item Value
gene id CI01000013_08216673_08226743
gene name PARP12A, PARP12
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 8216599 ~ 8227774 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_08216673_08226743.mRNA
GTTTAAATGCCCCAAAACATCGGCCAAACCCTAAGCAGTGAAAACTAATACTGTTGTTGACGGCATCAACGAAAATGACGTCTATCGTCTCTAGACACATATTTAACTTTCTCTGCAAACATGAAGGCTGTACGGACTATGGTAAAGTCGAGAGGAATTTACGGCAGAGTTTCACGGTGGCGGATCAGGTTTTGTCTCAGGTGCTCCATGATCACCAGAGGTTTGTTATAATTCAGGATGAAGGCTCGAATCCCAGAAGCTCCATACCAGCTGCTGACAGCCTGATCTTAGCCAAAACCTCACTGCGAGTGTGTAAAAATGACAAATGTACCGGGTGTGAAGAACTACACCTCTGCAGGTACTTTGTATGTGGAAATTGCAGATTTGGGGCAAAATGCAAAAATTCCCATGACTTGACATCAGCACATAATTCTGACCTCCTGAAAAATAACGATCTTTATGGCCTTGCGAGTGGAGAGTTGTTTCAACTTCTGCTTCAAAATGACCCTTCATTACTTCCAGAGGTGTGCCCCCACTACAACAAGGGGATTGGTGAATATGGCAGTTGCAAATATCAAACAAAGTGTACCAACCTGCACCTCTGCCAGCACTTCCTGCAGGATGACTGTAAGTTTGGAAAAGGCTGCAAAAGGCTCCACAGCTTTGATGCAAATGCCCTGAAAATTCTGAATGCCCGAGGACTCGGTCCAGAAAACATGAGCAAACTCCTCAGGCTTTACAAGAGCAAGTTACTAATTGCTTCTTCCGCTTTCAAGAAAAGTGAGACAGCAGCTCTACCAGCAGTGAGAGGACGCACCAAACACAAATCCAGTAGCTCTATCAGTGAAGCGGATCAAAATGAAATCTGTCTCTTTTTCATACGCACTGGATGTAGCTTCAAAGACAAGTGTGCCCGTTTTCACCACCATCTACCCTATAAATGGCAGATATTACAGAAGGATGGAACTACATGGGGTGACTTACTGAATGAAGAGGAGGTTGAGAAGGAATACTGCAGTCCAGCTAATGTTCTGTGTATTATCCAGAGCAGCTCGGGAAATCAGGTAGTGGACTTTATGTCAATGACTTGCGGAGTGTCAGAAATCCGTCGGCTGTCCACAGCATCTTCTGTTACTAAACCACCCCATTTCATTCTGACCACTGAATGGATCTGGTACTGGAGGAATGACAAGGGAGGTTGGACGGAGTATGGCAAAGGGGAAGATTCTAAACTCGTGGCATCAGTCACCTCAGAAGACCTCGAGAAACATTACCTGGCTGACAGTGAAAAGGAGATCACATTCACTTCACAGAACCATCAATACATCCTCAAATTTAAAGAAGCGAGTCTTCAGACAGCTCAGCATCTTCTTCTGTGGAAGTTCCTCCTTATTGGGACAAAGGAGCTCTTCCTAGCTTCACCTACAAGGCAAAAAGAACAAATGAATTTGAAGAATGGAGGGAGTGGTGTGGACCAGCGTTACCTTTTCCATGGTACGGATGAGTCTTACATAGAGGCCATCTGTGAGCAGAACTTTGACTGGAGGATCTGTGGCAGTCATGGGACAAGTTATGGGAAAGGCAGCTATTTTGCCAGAGATGCCTTATACTCTGACAGATATGCAAAATCCAGGAACGGCAAGACCAAGAAGATGTTTGTGGCACTGGTGCTAGTCGGAGACTTCACAAGGGGTAACTGTAGTTTACTCCGTCCTCCACAGAAACCCCACAGTCAAAGCTTTTACGACAGCTGTGTTGACAATGAGACTAACCCGGCCATTTTTGTTGTGTTTGAGAAATTCCAGATCTATCCTGAGTACATCATTGAATACTCTTAATTTGTATAGTATCAAAATATTTTTAAATATATTTGATACATTTAAACATTCTAATAACGTAAAGCAGGTCTGTTTGTTTACTTAATTCTTGAAATAGTTGTGAATGTCCTGTTACATAAACAATTCATGTTAAAGTCCTCCTGTAGTAAATAATTCTATCCGTTAAAACTCATCTTTGATCACCAAAATTACATTTTTAAAGGTTTTTTTTTTTCCTGTGAAGAAAATTCTTAATGCCTTTTAAAATAGCTTGAATGTAACTCTACATGCTTGCTTCATTTATTACACGCAGATCTATGAATATGATAATTAGCCTCGCCTCCACTCACTCGCAAGAGCTCAGAGATCCACTCGGTCAACTTACTGAGGTTTCACAATGGTATCGCTTTTTACAATGTCTGACGGTAATTAATATGATTAGCCTTGTTTGACTACTTTATCAAACAGCCAATAATAAGTTGCTAATGTTACACAAACCATGTTCCCGTTCTTCATCTCAGAATCAGACAGCTGTCTTCTAACAATCAATATCCTTAGAAACGCTTCAAACAACTTAGAAGTGGAGAAAGGCACATAGTTCATCGTAATACACCCGCTATATTGCTAAATCTACCCGATTTTTCATATCAACAGAAAAATATACCGGGATAACCTGCCTTCTTTTGAGACTCCCTTGCACGGTCAGTTAATGATATGCTAAAGCTGATGTCACAAACACCAGTGATTTCAAACCGCATTTTTGAAACTGTCTTTAGATCACTGCAGTTTTAAAGAGAAAATACTCAGCAACGGTTTTGACTTTGTACATGGTTTGTCTTAAAGCATATTAAAAACACCTAGACATATAAACATTAAAGACTTGATTTTCACCACAGGGGGACTTTAACATCACTGAACATTTCCATAATCTACAACTCTTGGGCATTTAAAGTATTGTCTTTCAAGAACACGTTTGTGGGGTATTACATATTGGGTAATTGTGTATTATCATAATTCATTTTACTAAACCATCTGTGGCAGATATAGCAGGA

Function

symbol description
parp12a Predicted to enable NAD+ ADP-ribosyltransferase activity and metal ion binding activity. Orthologous to human PARP12 (poly(ADP-ribose) polymerase family member 12).
parp12 Enables protein ADP-ribosylase activity. Involved in protein auto-ADP-ribosylation and protein mono-ADP-ribosylation. Predicted to be located in nucleus.

NR:

description
Poly (ADP-ribose) polymerase family, member 12b

GO:

id name namespace
GO:0003950 NAD+ ADP-ribosyltransferase activity molecular_function

KEGG:

id description
K15259 PARP7S; poly [ADP-ribose] polymerase 7/11/12/13

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_08216673_08226743.mRNA True 2869 mRNA 0.41 10 8216599 8227774

Neighbor

gene id symbol gene type direction distance location
CI01000013_08139954_08212837 SRGAP1A, SRGAP1 coding upstream 3762 8139954 ~ 8212837 (+)
CI01000013_08107786_08113703 NA coding upstream 102868 8106676 ~ 8113731 (+)
CI01000013_08101166_08105054 TMEM5 coding upstream 111385 8101166 ~ 8105214 (+)
CI01000013_08095012_08097899 CS012 coding upstream 118066 8095012 ~ 8098533 (+)
CI01000013_08066408_08071727 KLHL36 coding upstream 144627 8065209 ~ 8071972 (+)
CI01000013_08336335_08399543 HIPK2 coding downstream 108561 8336335 ~ 8399621 (+)
CI01000013_08402498_08414755 NA coding downstream 174028 8401802 ~ 8416190 (+)
CI01000013_08448494_08481411 NA coding downstream 219501 8447275 ~ 8482911 (+)
CI01000013_08485928_08493559 NA coding downstream 257627 8485401 ~ 8493623 (+)
CI01000013_08519555_08527531 FAM107B coding downstream 291336 8519110 ~ 8527711 (+)
G82178 NA non-coding upstream 129583 8083578 ~ 8087016 (+)
G82184 NA non-coding upstream 139297 8074660 ~ 8077302 (+)
G82146 NA non-coding upstream 156774 8011261 ~ 8059825 (+)
G82157 NA non-coding upstream 200233 8015253 ~ 8016366 (+)
G82339 NA non-coding upstream 263603 7952768 ~ 7952996 (+)
G82162 NA non-coding downstream 953 8228727 ~ 8230128 (+)
G82155 NA non-coding downstream 24939 8252713 ~ 8305402 (+)
CI01000013_08652173_08660558 NA non-coding downstream 381250 8652173 ~ 8661156 (+)
G82453 NA non-coding downstream 472842 8700616 ~ 8700839 (+)
G82503 NA non-coding downstream 606298 8834072 ~ 8846060 (+)
G82168 NA other upstream 175256 8028338 ~ 8041343 (+)
G81994 NA other upstream 878360 7335945 ~ 7338239 (+)
CI01000013_06076169_06080164 NA other upstream 2134232 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA other upstream 2157103 6049864 ~ 6060269 (+)
G80845 NA other upstream 3380367 4835078 ~ 4836232 (+)
G82581 NA other downstream 1101555 9329329 ~ 9334948 (+)
G84005 NA other downstream 1373837 9601611 ~ 9602235 (+)
G84194 NA other downstream 1802834 10030608 ~ 10036953 (+)
G84215 NA other downstream 1848680 10076454 ~ 10079336 (+)
G84250 NA other downstream 1987353 10215127 ~ 10215962 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_013283 parp12a coding NC_007129.7 CM002902.2 12839126 ~ 12858016 (-)